Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Six2Q62232 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Six2Q62232 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Six2Q62232 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Six2Q62232 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Six2Q62232 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Six2Q62232 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Six2Q62232 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC17.01■□□□□ 0.31
Six2Q62232 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Six2Q62232 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Six2Q62232 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC17.01■□□□□ 0.31
Six2Q62232 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Six2Q62232 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Six2Q62232 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Six2Q62232 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Six2Q62232 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
Six2Q62232 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Six2Q62232 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Six2Q62232 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Six2Q62232 Gm6257-201ENSMUST00000163864 910 ntBASIC17.01■□□□□ 0.31
Six2Q62232 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Six2Q62232 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Six2Q62232 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC17.01■□□□□ 0.31
Six2Q62232 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
Six2Q62232 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Six2Q62232 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Six2Q62232 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Six2Q62232 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Six2Q62232 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Six2Q62232 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Six2Q62232 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Six2Q62232 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Six2Q62232 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Six2Q62232 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Six2Q62232 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC17.01■□□□□ 0.31
Six2Q62232 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Six2Q62232 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Six2Q62232 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC17■□□□□ 0.31
Six2Q62232 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Six2Q62232 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17■□□□□ 0.31
Six2Q62232 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Six2Q62232 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17■□□□□ 0.31
Six2Q62232 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Six2Q62232 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC17■□□□□ 0.31
Six2Q62232 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC17■□□□□ 0.31
Six2Q62232 Mir3081-201ENSMUST00000175305 84 ntBASIC17■□□□□ 0.31
Six2Q62232 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Six2Q62232 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC17■□□□□ 0.31
Six2Q62232 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Six2Q62232 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17■□□□□ 0.31
Six2Q62232 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Six2Q62232 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Six2Q62232 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Six2Q62232 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Six2Q62232 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Six2Q62232 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC17■□□□□ 0.31
Six2Q62232 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Six2Q62232 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC17■□□□□ 0.31
Six2Q62232 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Six2Q62232 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC17■□□□□ 0.31
Six2Q62232 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Six2Q62232 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Six2Q62232 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Six2Q62232 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Six2Q62232 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
Six2Q62232 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Six2Q62232 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Six2Q62232 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Six2Q62232 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.99■□□□□ 0.31
Six2Q62232 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.99■□□□□ 0.31
Six2Q62232 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Six2Q62232 Gm25406-201ENSMUST00000157599 105 ntBASIC16.99■□□□□ 0.31
Six2Q62232 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.99■□□□□ 0.31
Six2Q62232 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.99■□□□□ 0.31
Six2Q62232 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Six2Q62232 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Six2Q62232 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Six2Q62232 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Six2Q62232 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Six2Q62232 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Six2Q62232 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.99■□□□□ 0.31
Six2Q62232 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Six2Q62232 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Six2Q62232 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Six2Q62232 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC16.98■□□□□ 0.31
Six2Q62232 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Six2Q62232 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Six2Q62232 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Six2Q62232 Gm27704-201ENSMUST00000185094 107 ntBASIC16.98■□□□□ 0.31
Six2Q62232 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Six2Q62232 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Six2Q62232 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Six2Q62232 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Six2Q62232 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Six2Q62232 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Six2Q62232 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Six2Q62232 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Six2Q62232 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Six2Q62232 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Six2Q62232 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms