Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Scn9aQ62205 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Scn9aQ62205 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scn9aQ62205 Gm9385-201ENSMUST00000117563 472 ntBASIC18.68■□□□□ 0.58
Scn9aQ62205 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC18.68■□□□□ 0.58
Scn9aQ62205 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC18.68■□□□□ 0.58
Scn9aQ62205 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC18.68■□□□□ 0.58
Scn9aQ62205 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Scn9aQ62205 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Scn9aQ62205 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scn9aQ62205 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scn9aQ62205 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC18.68■□□□□ 0.58
Scn9aQ62205 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Scn9aQ62205 AC126250.1-201ENSMUST00000228343 1768 ntBASIC18.68■□□□□ 0.58
Scn9aQ62205 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scn9aQ62205 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scn9aQ62205 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scn9aQ62205 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Scn9aQ62205 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scn9aQ62205 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
Scn9aQ62205 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC18.68■□□□□ 0.58
Scn9aQ62205 Gm5866-201ENSMUST00000177881 973 ntBASIC18.68■□□□□ 0.58
Scn9aQ62205 AC125206.2-201ENSMUST00000217454 574 ntBASIC18.68■□□□□ 0.58
Scn9aQ62205 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Scn9aQ62205 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scn9aQ62205 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC18.68■□□□□ 0.58
Scn9aQ62205 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scn9aQ62205 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scn9aQ62205 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Scn9aQ62205 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scn9aQ62205 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scn9aQ62205 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scn9aQ62205 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scn9aQ62205 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC18.67■□□□□ 0.58
Scn9aQ62205 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Scn9aQ62205 Gm7774-201ENSMUST00000200064 533 ntBASIC18.67■□□□□ 0.58
Scn9aQ62205 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Scn9aQ62205 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
Scn9aQ62205 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Scn9aQ62205 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Scn9aQ62205 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Scn9aQ62205 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scn9aQ62205 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scn9aQ62205 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scn9aQ62205 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Scn9aQ62205 Gm43767-201ENSMUST00000198933 381 ntBASIC18.66■□□□□ 0.58
Scn9aQ62205 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scn9aQ62205 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC18.66■□□□□ 0.58
Scn9aQ62205 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scn9aQ62205 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scn9aQ62205 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Scn9aQ62205 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scn9aQ62205 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scn9aQ62205 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
Scn9aQ62205 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Scn9aQ62205 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scn9aQ62205 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scn9aQ62205 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scn9aQ62205 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC18.66■□□□□ 0.58
Scn9aQ62205 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Scn9aQ62205 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scn9aQ62205 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC18.65■□□□□ 0.58
Scn9aQ62205 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scn9aQ62205 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scn9aQ62205 Gm12008-201ENSMUST00000117791 755 ntBASIC18.65■□□□□ 0.58
Scn9aQ62205 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC18.65■□□□□ 0.58
Scn9aQ62205 Gm19164-201ENSMUST00000210667 640 ntBASIC18.65■□□□□ 0.58
Scn9aQ62205 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scn9aQ62205 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scn9aQ62205 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scn9aQ62205 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Scn9aQ62205 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scn9aQ62205 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Scn9aQ62205 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Scn9aQ62205 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Scn9aQ62205 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC18.64■□□□□ 0.58
Scn9aQ62205 AC122024.2-201ENSMUST00000220086 871 ntBASIC18.64■□□□□ 0.58
Scn9aQ62205 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Scn9aQ62205 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC18.64■□□□□ 0.58
Scn9aQ62205 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
Scn9aQ62205 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scn9aQ62205 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scn9aQ62205 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scn9aQ62205 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Scn9aQ62205 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scn9aQ62205 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC18.64■□□□□ 0.57
Scn9aQ62205 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC18.64■□□□□ 0.57
Scn9aQ62205 Gm13223-201ENSMUST00000118609 747 ntBASIC18.64■□□□□ 0.57
Scn9aQ62205 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Scn9aQ62205 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Scn9aQ62205 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scn9aQ62205 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC18.64■□□□□ 0.57
Scn9aQ62205 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Scn9aQ62205 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC18.63■□□□□ 0.57
Scn9aQ62205 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Scn9aQ62205 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC18.63■□□□□ 0.57
Scn9aQ62205 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scn9aQ62205 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC18.63■□□□□ 0.57
Scn9aQ62205 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scn9aQ62205 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms