Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Foxc1Q61572 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Foxc1Q61572 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Foxc1Q61572 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Foxc1Q61572 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Foxc1Q61572 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Foxc1Q61572 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC11.75□□□□□ -0.53
Foxc1Q61572 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Foxc1Q61572 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC11.75□□□□□ -0.53
Foxc1Q61572 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC11.75□□□□□ -0.53
Foxc1Q61572 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Foxc1Q61572 Mir3081-201ENSMUST00000175305 84 ntBASIC11.75□□□□□ -0.53
Foxc1Q61572 2010110E17Rik-201ENSMUST00000184161 879 ntBASIC11.75□□□□□ -0.53
Foxc1Q61572 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Foxc1Q61572 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Foxc1Q61572 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC11.75□□□□□ -0.53
Foxc1Q61572 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Foxc1Q61572 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Foxc1Q61572 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Foxc1Q61572 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Foxc1Q61572 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Foxc1Q61572 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Foxc1Q61572 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Foxc1Q61572 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Foxc1Q61572 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Foxc1Q61572 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Foxc1Q61572 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Foxc1Q61572 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Foxc1Q61572 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
Foxc1Q61572 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Foxc1Q61572 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Foxc1Q61572 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC11.74□□□□□ -0.53
Foxc1Q61572 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Foxc1Q61572 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Foxc1Q61572 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Foxc1Q61572 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Foxc1Q61572 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Foxc1Q61572 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Foxc1Q61572 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Foxc1Q61572 Gm28033-201ENSMUST00000184224 96 ntBASIC11.74□□□□□ -0.53
Foxc1Q61572 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC11.74□□□□□ -0.53
Foxc1Q61572 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC11.74□□□□□ -0.53
Foxc1Q61572 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC11.74□□□□□ -0.53
Foxc1Q61572 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Foxc1Q61572 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Foxc1Q61572 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Foxc1Q61572 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Foxc1Q61572 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Foxc1Q61572 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Foxc1Q61572 Gm9519-201ENSMUST00000206108 1337 ntBASIC11.74□□□□□ -0.53
Foxc1Q61572 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC11.74□□□□□ -0.53
Foxc1Q61572 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
Foxc1Q61572 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Foxc1Q61572 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Foxc1Q61572 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Foxc1Q61572 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Foxc1Q61572 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Foxc1Q61572 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Foxc1Q61572 Gm45203-201ENSMUST00000206384 1831 ntBASIC11.74□□□□□ -0.53
Foxc1Q61572 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Foxc1Q61572 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Foxc1Q61572 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Foxc1Q61572 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Foxc1Q61572 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Foxc1Q61572 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Foxc1Q61572 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Foxc1Q61572 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Foxc1Q61572 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC11.73□□□□□ -0.53
Foxc1Q61572 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Foxc1Q61572 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Foxc1Q61572 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Foxc1Q61572 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Foxc1Q61572 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Foxc1Q61572 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Foxc1Q61572 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Foxc1Q61572 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Foxc1Q61572 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Foxc1Q61572 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Foxc1Q61572 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC11.73□□□□□ -0.53
Foxc1Q61572 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC11.73□□□□□ -0.53
Foxc1Q61572 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Foxc1Q61572 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC11.73□□□□□ -0.53
Foxc1Q61572 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC11.73□□□□□ -0.53
Foxc1Q61572 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC11.73□□□□□ -0.53
Foxc1Q61572 Ighv6-1-201ENSMUST00000193612 343 ntBASIC11.73□□□□□ -0.53
Foxc1Q61572 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Foxc1Q61572 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC11.73□□□□□ -0.53
Foxc1Q61572 AC154634.3-201ENSMUST00000224589 736 ntBASIC11.73□□□□□ -0.53
Foxc1Q61572 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC11.73□□□□□ -0.53
Foxc1Q61572 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Foxc1Q61572 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Foxc1Q61572 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Foxc1Q61572 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Foxc1Q61572 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Foxc1Q61572 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Foxc1Q61572 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Foxc1Q61572 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Foxc1Q61572 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Foxc1Q61572 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC11.73□□□□□ -0.53
Foxc1Q61572 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms