Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.71■□□□□ 0.43
Ift88Q61371 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Ift88Q61371 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ift88Q61371 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ift88Q61371 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ift88Q61371 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ift88Q61371 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
Ift88Q61371 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Ift88Q61371 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Ift88Q61371 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ift88Q61371 Gm9867-201ENSMUST00000192212 2647 ntBASIC17.7■□□□□ 0.42
Ift88Q61371 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ift88Q61371 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ift88Q61371 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ift88Q61371 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC17.7■□□□□ 0.42
Ift88Q61371 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ift88Q61371 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ift88Q61371 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ift88Q61371 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC17.7■□□□□ 0.42
Ift88Q61371 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ift88Q61371 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ift88Q61371 Mir5130-201ENSMUST00000175160 84 ntBASIC17.7■□□□□ 0.42
Ift88Q61371 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ift88Q61371 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ift88Q61371 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Ift88Q61371 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ift88Q61371 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ift88Q61371 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC17.7■□□□□ 0.42
Ift88Q61371 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ift88Q61371 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ift88Q61371 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ift88Q61371 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ift88Q61371 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ift88Q61371 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ift88Q61371 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ift88Q61371 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ift88Q61371 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ift88Q61371 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ift88Q61371 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ift88Q61371 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ift88Q61371 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.69■□□□□ 0.42
Ift88Q61371 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.69■□□□□ 0.42
Ift88Q61371 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ift88Q61371 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ift88Q61371 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.69■□□□□ 0.42
Ift88Q61371 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.69■□□□□ 0.42
Ift88Q61371 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.69■□□□□ 0.42
Ift88Q61371 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ift88Q61371 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ift88Q61371 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ift88Q61371 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ift88Q61371 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC17.69■□□□□ 0.42
Ift88Q61371 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Ift88Q61371 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ift88Q61371 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ift88Q61371 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ift88Q61371 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ift88Q61371 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ift88Q61371 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ift88Q61371 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ift88Q61371 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ift88Q61371 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ift88Q61371 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ift88Q61371 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ift88Q61371 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Ift88Q61371 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ift88Q61371 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ift88Q61371 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.68■□□□□ 0.42
Ift88Q61371 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ift88Q61371 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ift88Q61371 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Ift88Q61371 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ift88Q61371 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.68■□□□□ 0.42
Ift88Q61371 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Ift88Q61371 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ift88Q61371 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Ift88Q61371 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ift88Q61371 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ift88Q61371 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ift88Q61371 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ift88Q61371 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ift88Q61371 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ift88Q61371 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ift88Q61371 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ift88Q61371 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ift88Q61371 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ift88Q61371 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ift88Q61371 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.67■□□□□ 0.42
Ift88Q61371 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.67■□□□□ 0.42
Ift88Q61371 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.67■□□□□ 0.42
Ift88Q61371 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ift88Q61371 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ift88Q61371 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC17.67■□□□□ 0.42
Ift88Q61371 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ift88Q61371 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Ift88Q61371 Gm42901-201ENSMUST00000197735 3171 ntBASIC17.67■□□□□ 0.42
Ift88Q61371 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ift88Q61371 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ift88Q61371 Gm6858-201ENSMUST00000208582 1468 ntBASIC17.67■□□□□ 0.42
Ift88Q61371 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms