Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Col12a1Q60847 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col12a1Q60847 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC15.66■□□□□ 0.1
Col12a1Q60847 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Col12a1Q60847 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC15.66■□□□□ 0.1
Col12a1Q60847 Gm7787-201ENSMUST00000216858 688 ntBASIC15.66■□□□□ 0.1
Col12a1Q60847 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col12a1Q60847 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
Col12a1Q60847 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col12a1Q60847 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col12a1Q60847 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col12a1Q60847 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col12a1Q60847 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.66■□□□□ 0.1
Col12a1Q60847 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Col12a1Q60847 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC15.66■□□□□ 0.1
Col12a1Q60847 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC15.66■□□□□ 0.1
Col12a1Q60847 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col12a1Q60847 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Col12a1Q60847 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Col12a1Q60847 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Col12a1Q60847 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col12a1Q60847 Gm18489-201ENSMUST00000172565 551 ntBASIC15.66■□□□□ 0.1
Col12a1Q60847 Gm18057-201ENSMUST00000208220 503 ntBASIC15.66■□□□□ 0.1
Col12a1Q60847 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col12a1Q60847 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col12a1Q60847 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Col12a1Q60847 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Col12a1Q60847 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col12a1Q60847 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col12a1Q60847 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col12a1Q60847 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col12a1Q60847 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC15.65■□□□□ 0.1
Col12a1Q60847 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Col12a1Q60847 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC15.65■□□□□ 0.1
Col12a1Q60847 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC15.65■□□□□ 0.1
Col12a1Q60847 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Col12a1Q60847 AC166341.4-201ENSMUST00000220625 123 ntBASIC15.65■□□□□ 0.1
Col12a1Q60847 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC15.65■□□□□ 0.1
Col12a1Q60847 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col12a1Q60847 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col12a1Q60847 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Col12a1Q60847 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col12a1Q60847 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Col12a1Q60847 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col12a1Q60847 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col12a1Q60847 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col12a1Q60847 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Col12a1Q60847 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col12a1Q60847 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC15.65■□□□□ 0.1
Col12a1Q60847 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Col12a1Q60847 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Col12a1Q60847 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col12a1Q60847 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
Col12a1Q60847 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col12a1Q60847 Gm29361-201ENSMUST00000183323 2000 ntBASIC15.64■□□□□ 0.09
Col12a1Q60847 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col12a1Q60847 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col12a1Q60847 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col12a1Q60847 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Col12a1Q60847 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col12a1Q60847 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Col12a1Q60847 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC15.64■□□□□ 0.09
Col12a1Q60847 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC15.64■□□□□ 0.09
Col12a1Q60847 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC15.64■□□□□ 0.09
Col12a1Q60847 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Col12a1Q60847 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
Col12a1Q60847 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Col12a1Q60847 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col12a1Q60847 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col12a1Q60847 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC15.64■□□□□ 0.09
Col12a1Q60847 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
Col12a1Q60847 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC15.64■□□□□ 0.09
Col12a1Q60847 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC15.64■□□□□ 0.09
Col12a1Q60847 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC15.64■□□□□ 0.09
Col12a1Q60847 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col12a1Q60847 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col12a1Q60847 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Col12a1Q60847 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Col12a1Q60847 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Col12a1Q60847 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
Col12a1Q60847 Gm18062-201ENSMUST00000208020 547 ntBASIC15.63■□□□□ 0.09
Col12a1Q60847 Gm18055-201ENSMUST00000208254 547 ntBASIC15.63■□□□□ 0.09
Col12a1Q60847 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC15.63■□□□□ 0.09
Col12a1Q60847 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col12a1Q60847 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Col12a1Q60847 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col12a1Q60847 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col12a1Q60847 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.63■□□□□ 0.09
Col12a1Q60847 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col12a1Q60847 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Col12a1Q60847 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC15.63■□□□□ 0.09
Col12a1Q60847 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Col12a1Q60847 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC15.63■□□□□ 0.09
Col12a1Q60847 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Col12a1Q60847 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col12a1Q60847 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col12a1Q60847 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col12a1Q60847 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col12a1Q60847 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col12a1Q60847 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms