Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Shroom1Q5SX79 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Shroom1Q5SX79 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
Shroom1Q5SX79 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Shroom1Q5SX79 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
Shroom1Q5SX79 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Shroom1Q5SX79 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Shroom1Q5SX79 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Shroom1Q5SX79 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Shroom1Q5SX79 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Shroom1Q5SX79 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Shroom1Q5SX79 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC16.96■□□□□ 0.31
Shroom1Q5SX79 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC16.96■□□□□ 0.31
Shroom1Q5SX79 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC16.96■□□□□ 0.31
Shroom1Q5SX79 Gm9172-201ENSMUST00000212092 954 ntBASIC16.96■□□□□ 0.31
Shroom1Q5SX79 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Shroom1Q5SX79 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.96■□□□□ 0.31
Shroom1Q5SX79 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Shroom1Q5SX79 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC16.96■□□□□ 0.31
Shroom1Q5SX79 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Shroom1Q5SX79 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.96■□□□□ 0.31
Shroom1Q5SX79 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Shroom1Q5SX79 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Shroom1Q5SX79 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Shroom1Q5SX79 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Shroom1Q5SX79 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Shroom1Q5SX79 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.96■□□□□ 0.3
Shroom1Q5SX79 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.96■□□□□ 0.3
Shroom1Q5SX79 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Shroom1Q5SX79 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shroom1Q5SX79 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shroom1Q5SX79 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shroom1Q5SX79 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shroom1Q5SX79 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shroom1Q5SX79 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Shroom1Q5SX79 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shroom1Q5SX79 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Shroom1Q5SX79 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shroom1Q5SX79 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.95■□□□□ 0.3
Shroom1Q5SX79 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.95■□□□□ 0.3
Shroom1Q5SX79 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shroom1Q5SX79 Gm13418-201ENSMUST00000119097 944 ntBASIC16.95■□□□□ 0.3
Shroom1Q5SX79 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shroom1Q5SX79 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC16.95■□□□□ 0.3
Shroom1Q5SX79 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.95■□□□□ 0.3
Shroom1Q5SX79 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shroom1Q5SX79 Gm5867-201ENSMUST00000063197 592 ntBASIC16.95■□□□□ 0.3
Shroom1Q5SX79 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Shroom1Q5SX79 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Shroom1Q5SX79 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
Shroom1Q5SX79 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shroom1Q5SX79 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Shroom1Q5SX79 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shroom1Q5SX79 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Shroom1Q5SX79 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Shroom1Q5SX79 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shroom1Q5SX79 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Shroom1Q5SX79 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Shroom1Q5SX79 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Shroom1Q5SX79 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Shroom1Q5SX79 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Shroom1Q5SX79 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Shroom1Q5SX79 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Shroom1Q5SX79 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Shroom1Q5SX79 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Shroom1Q5SX79 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Shroom1Q5SX79 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Shroom1Q5SX79 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC16.94■□□□□ 0.3
Shroom1Q5SX79 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.94■□□□□ 0.3
Shroom1Q5SX79 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Shroom1Q5SX79 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC16.94■□□□□ 0.3
Shroom1Q5SX79 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC16.94■□□□□ 0.3
Shroom1Q5SX79 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Shroom1Q5SX79 Gm43073-201ENSMUST00000198200 1189 ntBASIC16.94■□□□□ 0.3
Shroom1Q5SX79 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC16.94■□□□□ 0.3
Shroom1Q5SX79 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Shroom1Q5SX79 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Shroom1Q5SX79 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Shroom1Q5SX79 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.94■□□□□ 0.3
Shroom1Q5SX79 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Shroom1Q5SX79 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.94■□□□□ 0.3
Shroom1Q5SX79 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Shroom1Q5SX79 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Shroom1Q5SX79 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Shroom1Q5SX79 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Shroom1Q5SX79 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.94■□□□□ 0.3
Shroom1Q5SX79 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shroom1Q5SX79 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Shroom1Q5SX79 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Shroom1Q5SX79 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shroom1Q5SX79 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Shroom1Q5SX79 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.93■□□□□ 0.3
Shroom1Q5SX79 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Shroom1Q5SX79 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Shroom1Q5SX79 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Shroom1Q5SX79 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shroom1Q5SX79 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shroom1Q5SX79 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shroom1Q5SX79 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shroom1Q5SX79 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms