Protein–RNA interactions for Protein: Q5SP85

Ccdc85a, Coiled-coil domain-containing protein 85A, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85aQ5SP85 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc85aQ5SP85 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc85aQ5SP85 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc85aQ5SP85 AA543401-201ENSMUST00000164248 1269 ntBASIC17.59■□□□□ 0.41
Ccdc85aQ5SP85 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
Ccdc85aQ5SP85 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC17.59■□□□□ 0.41
Ccdc85aQ5SP85 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC17.59■□□□□ 0.41
Ccdc85aQ5SP85 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc85aQ5SP85 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc85aQ5SP85 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc85aQ5SP85 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc85aQ5SP85 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.41
Ccdc85aQ5SP85 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ccdc85aQ5SP85 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ccdc85aQ5SP85 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ccdc85aQ5SP85 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ccdc85aQ5SP85 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ccdc85aQ5SP85 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc85aQ5SP85 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Ccdc85aQ5SP85 Gm27494-201ENSMUST00000184735 189 ntBASIC17.58■□□□□ 0.4
Ccdc85aQ5SP85 Gm17968-201ENSMUST00000194902 784 ntBASIC17.58■□□□□ 0.4
Ccdc85aQ5SP85 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC17.58■□□□□ 0.4
Ccdc85aQ5SP85 AC147366.1-201ENSMUST00000227671 852 ntBASIC17.58■□□□□ 0.4
Ccdc85aQ5SP85 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc85aQ5SP85 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc85aQ5SP85 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.58■□□□□ 0.4
Ccdc85aQ5SP85 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc85aQ5SP85 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc85aQ5SP85 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc85aQ5SP85 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc85aQ5SP85 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc85aQ5SP85 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC17.57■□□□□ 0.4
Ccdc85aQ5SP85 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc85aQ5SP85 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Ccdc85aQ5SP85 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc85aQ5SP85 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.57■□□□□ 0.4
Ccdc85aQ5SP85 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Ccdc85aQ5SP85 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc85aQ5SP85 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc85aQ5SP85 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc85aQ5SP85 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc85aQ5SP85 Mir1895-201ENSMUST00000122615 79 ntBASIC17.57■□□□□ 0.4
Ccdc85aQ5SP85 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC17.57■□□□□ 0.4
Ccdc85aQ5SP85 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC17.57■□□□□ 0.4
Ccdc85aQ5SP85 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC17.57■□□□□ 0.4
Ccdc85aQ5SP85 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC17.57■□□□□ 0.4
Ccdc85aQ5SP85 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc85aQ5SP85 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc85aQ5SP85 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc85aQ5SP85 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc85aQ5SP85 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc85aQ5SP85 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc85aQ5SP85 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Ccdc85aQ5SP85 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc85aQ5SP85 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc85aQ5SP85 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc85aQ5SP85 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc85aQ5SP85 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc85aQ5SP85 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc85aQ5SP85 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc85aQ5SP85 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc85aQ5SP85 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.56■□□□□ 0.4
Ccdc85aQ5SP85 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc85aQ5SP85 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc85aQ5SP85 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC17.56■□□□□ 0.4
Ccdc85aQ5SP85 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
Ccdc85aQ5SP85 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC17.56■□□□□ 0.4
Ccdc85aQ5SP85 Mir7036b-201ENSMUST00000184791 63 ntBASIC17.56■□□□□ 0.4
Ccdc85aQ5SP85 AC093926.2-201ENSMUST00000214468 1228 ntBASIC17.56■□□□□ 0.4
Ccdc85aQ5SP85 AC155252.2-201ENSMUST00000226946 680 ntBASIC17.56■□□□□ 0.4
Ccdc85aQ5SP85 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc85aQ5SP85 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc85aQ5SP85 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc85aQ5SP85 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc85aQ5SP85 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc85aQ5SP85 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc85aQ5SP85 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc85aQ5SP85 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.55■□□□□ 0.4
Ccdc85aQ5SP85 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc85aQ5SP85 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Ccdc85aQ5SP85 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
Ccdc85aQ5SP85 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Ccdc85aQ5SP85 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc85aQ5SP85 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc85aQ5SP85 Gm8344-201ENSMUST00000119813 856 ntBASIC17.55■□□□□ 0.4
Ccdc85aQ5SP85 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
Ccdc85aQ5SP85 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC17.55■□□□□ 0.4
Ccdc85aQ5SP85 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc85aQ5SP85 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Ccdc85aQ5SP85 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc85aQ5SP85 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc85aQ5SP85 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Ccdc85aQ5SP85 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc85aQ5SP85 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc85aQ5SP85 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc85aQ5SP85 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc85aQ5SP85 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc85aQ5SP85 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Ccdc85aQ5SP85 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC17.54■□□□□ 0.4
Ccdc85aQ5SP85 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms