Protein–RNA interactions for Protein: Q5QNQ9

Col27a1, Collagen alpha-1(XXVII) chain, mousemouse

Predictions only

Length 1,845 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1Q5QNQ9 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Col27a1Q5QNQ9 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Col27a1Q5QNQ9 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC15.3■□□□□ 0.04
Col27a1Q5QNQ9 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC15.3■□□□□ 0.04
Col27a1Q5QNQ9 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Col27a1Q5QNQ9 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Col27a1Q5QNQ9 Gm2272-201ENSMUST00000194903 582 ntBASIC15.3■□□□□ 0.04
Col27a1Q5QNQ9 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Col27a1Q5QNQ9 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Col27a1Q5QNQ9 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Col27a1Q5QNQ9 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col27a1Q5QNQ9 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Col27a1Q5QNQ9 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col27a1Q5QNQ9 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col27a1Q5QNQ9 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col27a1Q5QNQ9 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col27a1Q5QNQ9 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col27a1Q5QNQ9 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col27a1Q5QNQ9 Gm13015-201ENSMUST00000118674 204 ntBASIC15.29■□□□□ 0.04
Col27a1Q5QNQ9 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC15.29■□□□□ 0.04
Col27a1Q5QNQ9 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
Col27a1Q5QNQ9 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Col27a1Q5QNQ9 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col27a1Q5QNQ9 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col27a1Q5QNQ9 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col27a1Q5QNQ9 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col27a1Q5QNQ9 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col27a1Q5QNQ9 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col27a1Q5QNQ9 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col27a1Q5QNQ9 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Col27a1Q5QNQ9 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col27a1Q5QNQ9 Gm6912-201ENSMUST00000117218 544 ntBASIC15.29■□□□□ 0.04
Col27a1Q5QNQ9 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Col27a1Q5QNQ9 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Col27a1Q5QNQ9 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col27a1Q5QNQ9 Gm25857-201ENSMUST00000082788 129 ntBASIC15.29■□□□□ 0.04
Col27a1Q5QNQ9 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Col27a1Q5QNQ9 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col27a1Q5QNQ9 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Col27a1Q5QNQ9 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col27a1Q5QNQ9 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col27a1Q5QNQ9 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Col27a1Q5QNQ9 Gm43182-201ENSMUST00000199476 2528 ntBASIC15.28■□□□□ 0.04
Col27a1Q5QNQ9 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Col27a1Q5QNQ9 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col27a1Q5QNQ9 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col27a1Q5QNQ9 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col27a1Q5QNQ9 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Col27a1Q5QNQ9 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col27a1Q5QNQ9 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Col27a1Q5QNQ9 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col27a1Q5QNQ9 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col27a1Q5QNQ9 Fam105a-203ENSMUST00000226170 3043 ntBASIC15.27■□□□□ 0.04
Col27a1Q5QNQ9 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col27a1Q5QNQ9 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col27a1Q5QNQ9 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Col27a1Q5QNQ9 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
Col27a1Q5QNQ9 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC15.27■□□□□ 0.04
Col27a1Q5QNQ9 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Col27a1Q5QNQ9 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Col27a1Q5QNQ9 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col27a1Q5QNQ9 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Col27a1Q5QNQ9 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Col27a1Q5QNQ9 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col27a1Q5QNQ9 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col27a1Q5QNQ9 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col27a1Q5QNQ9 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col27a1Q5QNQ9 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col27a1Q5QNQ9 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Col27a1Q5QNQ9 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Col27a1Q5QNQ9 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col27a1Q5QNQ9 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Col27a1Q5QNQ9 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC15.27■□□□□ 0.03
Col27a1Q5QNQ9 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC15.27■□□□□ 0.03
Col27a1Q5QNQ9 Gm25144-201ENSMUST00000179561 110 ntBASIC15.27■□□□□ 0.03
Col27a1Q5QNQ9 Gm25352-201ENSMUST00000179815 110 ntBASIC15.27■□□□□ 0.03
Col27a1Q5QNQ9 Gm24694-201ENSMUST00000180054 110 ntBASIC15.27■□□□□ 0.03
Col27a1Q5QNQ9 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Col27a1Q5QNQ9 Gm27663-201ENSMUST00000184839 110 ntBASIC15.27■□□□□ 0.03
Col27a1Q5QNQ9 Gm45059-201ENSMUST00000205558 1077 ntBASIC15.27■□□□□ 0.03
Col27a1Q5QNQ9 Gm7775-201ENSMUST00000218871 853 ntBASIC15.27■□□□□ 0.03
Col27a1Q5QNQ9 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col27a1Q5QNQ9 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC15.27■□□□□ 0.03
Col27a1Q5QNQ9 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col27a1Q5QNQ9 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Col27a1Q5QNQ9 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col27a1Q5QNQ9 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col27a1Q5QNQ9 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Col27a1Q5QNQ9 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col27a1Q5QNQ9 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col27a1Q5QNQ9 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col27a1Q5QNQ9 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC15.26■□□□□ 0.03
Col27a1Q5QNQ9 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Col27a1Q5QNQ9 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col27a1Q5QNQ9 Gm18187-201ENSMUST00000196476 984 ntBASIC15.26■□□□□ 0.03
Col27a1Q5QNQ9 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col27a1Q5QNQ9 AC124732.1-201ENSMUST00000221551 910 ntBASIC15.26■□□□□ 0.03
Col27a1Q5QNQ9 Gm6888-201ENSMUST00000221983 706 ntBASIC15.26■□□□□ 0.03
Col27a1Q5QNQ9 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC15.26■□□□□ 0.03
Col27a1Q5QNQ9 AC125350.2-201ENSMUST00000224737 727 ntBASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms