Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rnf20Q5DTM8 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC19.03■□□□□ 0.64
Rnf20Q5DTM8 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rnf20Q5DTM8 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rnf20Q5DTM8 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rnf20Q5DTM8 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Rnf20Q5DTM8 Gm15794-201ENSMUST00000120182 631 ntBASIC19.03■□□□□ 0.64
Rnf20Q5DTM8 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rnf20Q5DTM8 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Rnf20Q5DTM8 Gm44729-201ENSMUST00000206759 2052 ntBASIC19.03■□□□□ 0.64
Rnf20Q5DTM8 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rnf20Q5DTM8 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Rnf20Q5DTM8 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rnf20Q5DTM8 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Rnf20Q5DTM8 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rnf20Q5DTM8 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Rnf20Q5DTM8 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rnf20Q5DTM8 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC19.02■□□□□ 0.64
Rnf20Q5DTM8 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rnf20Q5DTM8 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rnf20Q5DTM8 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rnf20Q5DTM8 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rnf20Q5DTM8 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rnf20Q5DTM8 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Rnf20Q5DTM8 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rnf20Q5DTM8 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Rnf20Q5DTM8 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rnf20Q5DTM8 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Rnf20Q5DTM8 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Rnf20Q5DTM8 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Rnf20Q5DTM8 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Rnf20Q5DTM8 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
Rnf20Q5DTM8 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Rnf20Q5DTM8 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Rnf20Q5DTM8 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rnf20Q5DTM8 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rnf20Q5DTM8 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rnf20Q5DTM8 Gm42473-201ENSMUST00000201056 2291 ntBASIC19.01■□□□□ 0.63
Rnf20Q5DTM8 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rnf20Q5DTM8 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC19.01■□□□□ 0.63
Rnf20Q5DTM8 Mir6404-201ENSMUST00000183699 94 ntBASIC19.01■□□□□ 0.63
Rnf20Q5DTM8 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC19.01■□□□□ 0.63
Rnf20Q5DTM8 AC130713.1-201ENSMUST00000228853 1096 ntBASIC19.01■□□□□ 0.63
Rnf20Q5DTM8 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rnf20Q5DTM8 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rnf20Q5DTM8 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rnf20Q5DTM8 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Rnf20Q5DTM8 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rnf20Q5DTM8 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Rnf20Q5DTM8 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rnf20Q5DTM8 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC19■□□□□ 0.63
Rnf20Q5DTM8 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC19■□□□□ 0.63
Rnf20Q5DTM8 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC19■□□□□ 0.63
Rnf20Q5DTM8 AC153526.5-201ENSMUST00000218661 2147 ntBASIC19■□□□□ 0.63
Rnf20Q5DTM8 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Rnf20Q5DTM8 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rnf20Q5DTM8 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Rnf20Q5DTM8 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC19■□□□□ 0.63
Rnf20Q5DTM8 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Rnf20Q5DTM8 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC19■□□□□ 0.63
Rnf20Q5DTM8 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Rnf20Q5DTM8 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
Rnf20Q5DTM8 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC19■□□□□ 0.63
Rnf20Q5DTM8 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rnf20Q5DTM8 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rnf20Q5DTM8 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rnf20Q5DTM8 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Rnf20Q5DTM8 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rnf20Q5DTM8 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Rnf20Q5DTM8 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC18.99■□□□□ 0.63
Rnf20Q5DTM8 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC18.99■□□□□ 0.63
Rnf20Q5DTM8 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC18.99■□□□□ 0.63
Rnf20Q5DTM8 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC18.99■□□□□ 0.63
Rnf20Q5DTM8 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rnf20Q5DTM8 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Rnf20Q5DTM8 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rnf20Q5DTM8 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Rnf20Q5DTM8 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Rnf20Q5DTM8 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rnf20Q5DTM8 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC18.99■□□□□ 0.63
Rnf20Q5DTM8 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rnf20Q5DTM8 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rnf20Q5DTM8 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rnf20Q5DTM8 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rnf20Q5DTM8 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rnf20Q5DTM8 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rnf20Q5DTM8 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Rnf20Q5DTM8 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rnf20Q5DTM8 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Rnf20Q5DTM8 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rnf20Q5DTM8 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC18.98■□□□□ 0.63
Rnf20Q5DTM8 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rnf20Q5DTM8 Gm13312-201ENSMUST00000119631 718 ntBASIC18.98■□□□□ 0.63
Rnf20Q5DTM8 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Rnf20Q5DTM8 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rnf20Q5DTM8 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rnf20Q5DTM8 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rnf20Q5DTM8 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rnf20Q5DTM8 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Rnf20Q5DTM8 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms