Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Scn2bQ56A07 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Scn2bQ56A07 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Scn2bQ56A07 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Scn2bQ56A07 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Scn2bQ56A07 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
Scn2bQ56A07 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Scn2bQ56A07 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn2bQ56A07 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn2bQ56A07 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn2bQ56A07 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Scn2bQ56A07 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn2bQ56A07 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn2bQ56A07 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
Scn2bQ56A07 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Scn2bQ56A07 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Scn2bQ56A07 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn2bQ56A07 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Scn2bQ56A07 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.82■□□□□ 0.12
Scn2bQ56A07 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Scn2bQ56A07 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn2bQ56A07 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn2bQ56A07 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn2bQ56A07 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Scn2bQ56A07 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn2bQ56A07 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn2bQ56A07 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn2bQ56A07 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn2bQ56A07 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn2bQ56A07 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn2bQ56A07 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn2bQ56A07 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn2bQ56A07 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Scn2bQ56A07 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn2bQ56A07 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn2bQ56A07 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn2bQ56A07 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Scn2bQ56A07 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Scn2bQ56A07 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn2bQ56A07 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn2bQ56A07 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scn2bQ56A07 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scn2bQ56A07 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scn2bQ56A07 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scn2bQ56A07 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Scn2bQ56A07 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Scn2bQ56A07 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scn2bQ56A07 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scn2bQ56A07 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Scn2bQ56A07 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
Scn2bQ56A07 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Scn2bQ56A07 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Scn2bQ56A07 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Scn2bQ56A07 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scn2bQ56A07 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scn2bQ56A07 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scn2bQ56A07 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scn2bQ56A07 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scn2bQ56A07 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.81■□□□□ 0.12
Scn2bQ56A07 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
Scn2bQ56A07 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC15.81■□□□□ 0.12
Scn2bQ56A07 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scn2bQ56A07 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Scn2bQ56A07 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scn2bQ56A07 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scn2bQ56A07 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scn2bQ56A07 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.8■□□□□ 0.12
Scn2bQ56A07 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scn2bQ56A07 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scn2bQ56A07 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Scn2bQ56A07 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC15.8■□□□□ 0.12
Scn2bQ56A07 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Scn2bQ56A07 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scn2bQ56A07 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Scn2bQ56A07 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scn2bQ56A07 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Scn2bQ56A07 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Scn2bQ56A07 Gm23634-201ENSMUST00000175071 91 ntBASIC15.8■□□□□ 0.12
Scn2bQ56A07 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scn2bQ56A07 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.8■□□□□ 0.12
Scn2bQ56A07 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scn2bQ56A07 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scn2bQ56A07 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scn2bQ56A07 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.8■□□□□ 0.12
Scn2bQ56A07 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scn2bQ56A07 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC15.79■□□□□ 0.12
Scn2bQ56A07 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Scn2bQ56A07 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scn2bQ56A07 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scn2bQ56A07 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scn2bQ56A07 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scn2bQ56A07 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Scn2bQ56A07 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Scn2bQ56A07 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Scn2bQ56A07 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Scn2bQ56A07 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.79■□□□□ 0.12
Scn2bQ56A07 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scn2bQ56A07 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scn2bQ56A07 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC15.79■□□□□ 0.12
Scn2bQ56A07 Gm11355-201ENSMUST00000121120 306 ntBASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms