Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Khdc4Q3TCX3 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Khdc4Q3TCX3 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC15.19■□□□□ 0.02
Khdc4Q3TCX3 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Khdc4Q3TCX3 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Khdc4Q3TCX3 Gm13312-201ENSMUST00000119631 718 ntBASIC15.19■□□□□ 0.02
Khdc4Q3TCX3 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC15.19■□□□□ 0.02
Khdc4Q3TCX3 Gm1818-201ENSMUST00000169406 1184 ntBASIC15.19■□□□□ 0.02
Khdc4Q3TCX3 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC15.19■□□□□ 0.02
Khdc4Q3TCX3 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC15.19■□□□□ 0.02
Khdc4Q3TCX3 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Khdc4Q3TCX3 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Khdc4Q3TCX3 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Khdc4Q3TCX3 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Khdc4Q3TCX3 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.19■□□□□ 0.02
Khdc4Q3TCX3 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Khdc4Q3TCX3 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Khdc4Q3TCX3 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Khdc4Q3TCX3 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Khdc4Q3TCX3 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Khdc4Q3TCX3 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Khdc4Q3TCX3 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Khdc4Q3TCX3 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Khdc4Q3TCX3 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Khdc4Q3TCX3 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Khdc4Q3TCX3 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Khdc4Q3TCX3 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Khdc4Q3TCX3 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.18■□□□□ 0.02
Khdc4Q3TCX3 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Khdc4Q3TCX3 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Khdc4Q3TCX3 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Khdc4Q3TCX3 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Khdc4Q3TCX3 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC15.18■□□□□ 0.02
Khdc4Q3TCX3 Gm27867-201ENSMUST00000184778 125 ntBASIC15.18■□□□□ 0.02
Khdc4Q3TCX3 AW822252-206ENSMUST00000208904 237 ntBASIC15.18■□□□□ 0.02
Khdc4Q3TCX3 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC15.18■□□□□ 0.02
Khdc4Q3TCX3 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Khdc4Q3TCX3 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC15.18■□□□□ 0.02
Khdc4Q3TCX3 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Khdc4Q3TCX3 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Khdc4Q3TCX3 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Khdc4Q3TCX3 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Khdc4Q3TCX3 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Khdc4Q3TCX3 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Khdc4Q3TCX3 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Khdc4Q3TCX3 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.18■□□□□ 0.02
Khdc4Q3TCX3 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Khdc4Q3TCX3 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Khdc4Q3TCX3 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Khdc4Q3TCX3 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Khdc4Q3TCX3 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Khdc4Q3TCX3 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Khdc4Q3TCX3 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Khdc4Q3TCX3 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Khdc4Q3TCX3 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Khdc4Q3TCX3 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Khdc4Q3TCX3 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Khdc4Q3TCX3 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Khdc4Q3TCX3 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Khdc4Q3TCX3 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Khdc4Q3TCX3 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Khdc4Q3TCX3 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Khdc4Q3TCX3 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Khdc4Q3TCX3 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Khdc4Q3TCX3 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC15.17■□□□□ 0.02
Khdc4Q3TCX3 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC15.17■□□□□ 0.02
Khdc4Q3TCX3 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC15.17■□□□□ 0.02
Khdc4Q3TCX3 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Khdc4Q3TCX3 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC15.17■□□□□ 0.02
Khdc4Q3TCX3 Gm20628-201ENSMUST00000177363 3215 ntBASIC15.17■□□□□ 0.02
Khdc4Q3TCX3 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Khdc4Q3TCX3 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Khdc4Q3TCX3 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Khdc4Q3TCX3 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Khdc4Q3TCX3 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Khdc4Q3TCX3 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Khdc4Q3TCX3 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Khdc4Q3TCX3 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Khdc4Q3TCX3 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Khdc4Q3TCX3 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Khdc4Q3TCX3 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC15.16■□□□□ 0.02
Khdc4Q3TCX3 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Khdc4Q3TCX3 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Khdc4Q3TCX3 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Khdc4Q3TCX3 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Khdc4Q3TCX3 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Khdc4Q3TCX3 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Khdc4Q3TCX3 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Khdc4Q3TCX3 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Khdc4Q3TCX3 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Khdc4Q3TCX3 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Khdc4Q3TCX3 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC15.16■□□□□ 0.02
Khdc4Q3TCX3 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Khdc4Q3TCX3 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Khdc4Q3TCX3 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Khdc4Q3TCX3 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Khdc4Q3TCX3 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Khdc4Q3TCX3 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Khdc4Q3TCX3 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Khdc4Q3TCX3 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms