Protein–RNA interactions for Protein: Q3SXB8

Colec11, Collectin-11, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colec11Q3SXB8 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Colec11Q3SXB8 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Colec11Q3SXB8 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Colec11Q3SXB8 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.17■□□□□ 0.18
Colec11Q3SXB8 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Colec11Q3SXB8 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.17■□□□□ 0.18
Colec11Q3SXB8 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Colec11Q3SXB8 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Colec11Q3SXB8 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Colec11Q3SXB8 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Colec11Q3SXB8 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.17■□□□□ 0.18
Colec11Q3SXB8 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Colec11Q3SXB8 Gm27867-201ENSMUST00000184778 125 ntBASIC16.17■□□□□ 0.18
Colec11Q3SXB8 Gm27459-201ENSMUST00000184860 107 ntBASIC16.17■□□□□ 0.18
Colec11Q3SXB8 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC16.17■□□□□ 0.18
Colec11Q3SXB8 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Colec11Q3SXB8 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Colec11Q3SXB8 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Colec11Q3SXB8 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.17■□□□□ 0.18
Colec11Q3SXB8 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Colec11Q3SXB8 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Colec11Q3SXB8 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Colec11Q3SXB8 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Colec11Q3SXB8 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.17■□□□□ 0.18
Colec11Q3SXB8 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Colec11Q3SXB8 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Colec11Q3SXB8 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Colec11Q3SXB8 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Colec11Q3SXB8 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Colec11Q3SXB8 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Colec11Q3SXB8 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Colec11Q3SXB8 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.16■□□□□ 0.18
Colec11Q3SXB8 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Colec11Q3SXB8 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Colec11Q3SXB8 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Colec11Q3SXB8 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.16■□□□□ 0.18
Colec11Q3SXB8 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.16■□□□□ 0.18
Colec11Q3SXB8 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.16■□□□□ 0.18
Colec11Q3SXB8 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Colec11Q3SXB8 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.16■□□□□ 0.18
Colec11Q3SXB8 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Colec11Q3SXB8 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Colec11Q3SXB8 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Colec11Q3SXB8 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Colec11Q3SXB8 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Colec11Q3SXB8 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Colec11Q3SXB8 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Colec11Q3SXB8 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Colec11Q3SXB8 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.16■□□□□ 0.18
Colec11Q3SXB8 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Colec11Q3SXB8 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Colec11Q3SXB8 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Colec11Q3SXB8 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Colec11Q3SXB8 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.15■□□□□ 0.18
Colec11Q3SXB8 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Colec11Q3SXB8 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Colec11Q3SXB8 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Colec11Q3SXB8 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Colec11Q3SXB8 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Colec11Q3SXB8 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC16.15■□□□□ 0.18
Colec11Q3SXB8 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.15■□□□□ 0.18
Colec11Q3SXB8 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Colec11Q3SXB8 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Colec11Q3SXB8 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.15■□□□□ 0.18
Colec11Q3SXB8 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Colec11Q3SXB8 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Colec11Q3SXB8 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Colec11Q3SXB8 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Colec11Q3SXB8 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Colec11Q3SXB8 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Colec11Q3SXB8 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Colec11Q3SXB8 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Colec11Q3SXB8 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
Colec11Q3SXB8 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.14■□□□□ 0.17
Colec11Q3SXB8 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Colec11Q3SXB8 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Colec11Q3SXB8 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Colec11Q3SXB8 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Colec11Q3SXB8 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Colec11Q3SXB8 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Colec11Q3SXB8 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.14■□□□□ 0.17
Colec11Q3SXB8 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Colec11Q3SXB8 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Colec11Q3SXB8 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Colec11Q3SXB8 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Colec11Q3SXB8 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Colec11Q3SXB8 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Colec11Q3SXB8 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Colec11Q3SXB8 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Colec11Q3SXB8 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Colec11Q3SXB8 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Colec11Q3SXB8 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Colec11Q3SXB8 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Colec11Q3SXB8 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Colec11Q3SXB8 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.13■□□□□ 0.17
Colec11Q3SXB8 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.13■□□□□ 0.17
Colec11Q3SXB8 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Colec11Q3SXB8 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Colec11Q3SXB8 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Colec11Q3SXB8 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms