Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC15.68■□□□□ 0.1
Sox4Q06831 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox4Q06831 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sox4Q06831 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox4Q06831 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.67■□□□□ 0.1
Sox4Q06831 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox4Q06831 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox4Q06831 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox4Q06831 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Sox4Q06831 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox4Q06831 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox4Q06831 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Sox4Q06831 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox4Q06831 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox4Q06831 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox4Q06831 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.67■□□□□ 0.1
Sox4Q06831 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox4Q06831 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Sox4Q06831 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Sox4Q06831 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC15.67■□□□□ 0.1
Sox4Q06831 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC15.67■□□□□ 0.1
Sox4Q06831 AC159301.1-201ENSMUST00000225130 1182 ntBASIC15.67■□□□□ 0.1
Sox4Q06831 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox4Q06831 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Sox4Q06831 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox4Q06831 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox4Q06831 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox4Q06831 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox4Q06831 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox4Q06831 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Sox4Q06831 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
Sox4Q06831 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox4Q06831 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox4Q06831 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox4Q06831 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox4Q06831 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox4Q06831 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox4Q06831 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox4Q06831 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC15.66■□□□□ 0.1
Sox4Q06831 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox4Q06831 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Sox4Q06831 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox4Q06831 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox4Q06831 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC15.66■□□□□ 0.1
Sox4Q06831 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC15.66■□□□□ 0.1
Sox4Q06831 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox4Q06831 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Sox4Q06831 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox4Q06831 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox4Q06831 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox4Q06831 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox4Q06831 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.66■□□□□ 0.1
Sox4Q06831 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Sox4Q06831 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Sox4Q06831 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Sox4Q06831 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.66■□□□□ 0.1
Sox4Q06831 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox4Q06831 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox4Q06831 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC15.65■□□□□ 0.1
Sox4Q06831 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox4Q06831 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC15.65■□□□□ 0.1
Sox4Q06831 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox4Q06831 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox4Q06831 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Sox4Q06831 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox4Q06831 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox4Q06831 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox4Q06831 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Sox4Q06831 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC15.65■□□□□ 0.1
Sox4Q06831 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
Sox4Q06831 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC15.65■□□□□ 0.1
Sox4Q06831 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Sox4Q06831 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox4Q06831 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Sox4Q06831 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Sox4Q06831 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox4Q06831 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox4Q06831 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox4Q06831 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox4Q06831 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox4Q06831 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.65■□□□□ 0.1
Sox4Q06831 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Sox4Q06831 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox4Q06831 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sox4Q06831 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sox4Q06831 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Sox4Q06831 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sox4Q06831 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sox4Q06831 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Sox4Q06831 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sox4Q06831 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sox4Q06831 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sox4Q06831 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sox4Q06831 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sox4Q06831 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sox4Q06831 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sox4Q06831 Gm4459-201ENSMUST00000118750 468 ntBASIC15.64■□□□□ 0.09
Sox4Q06831 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sox4Q06831 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sox4Q06831 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms