Protein–RNA interactions for Protein: Q05895

Thbs3, Thrombospondin-3, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3Q05895 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Thbs3Q05895 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC14.02□□□□□ -0.16
Thbs3Q05895 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Thbs3Q05895 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Thbs3Q05895 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Thbs3Q05895 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Thbs3Q05895 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Thbs3Q05895 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Thbs3Q05895 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Thbs3Q05895 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Thbs3Q05895 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Thbs3Q05895 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Thbs3Q05895 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC14.02□□□□□ -0.17
Thbs3Q05895 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Thbs3Q05895 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Thbs3Q05895 Gm44454-201ENSMUST00000198541 138 ntBASIC14.02□□□□□ -0.17
Thbs3Q05895 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC14.02□□□□□ -0.17
Thbs3Q05895 Gm7367-201ENSMUST00000057611 492 ntBASIC14.02□□□□□ -0.17
Thbs3Q05895 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Thbs3Q05895 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.02□□□□□ -0.17
Thbs3Q05895 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Thbs3Q05895 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Thbs3Q05895 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Thbs3Q05895 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Thbs3Q05895 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Thbs3Q05895 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC14.01□□□□□ -0.17
Thbs3Q05895 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.01□□□□□ -0.17
Thbs3Q05895 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Thbs3Q05895 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Thbs3Q05895 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC14.01□□□□□ -0.17
Thbs3Q05895 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Thbs3Q05895 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Thbs3Q05895 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Thbs3Q05895 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.01□□□□□ -0.17
Thbs3Q05895 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Thbs3Q05895 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Thbs3Q05895 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.01□□□□□ -0.17
Thbs3Q05895 Gm17807-201ENSMUST00000186869 298 ntBASIC14.01□□□□□ -0.17
Thbs3Q05895 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Thbs3Q05895 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Thbs3Q05895 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Thbs3Q05895 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Thbs3Q05895 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Thbs3Q05895 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC14.01□□□□□ -0.17
Thbs3Q05895 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Thbs3Q05895 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Thbs3Q05895 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Thbs3Q05895 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Thbs3Q05895 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Thbs3Q05895 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Thbs3Q05895 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Thbs3Q05895 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Thbs3Q05895 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Thbs3Q05895 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Thbs3Q05895 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Thbs3Q05895 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Thbs3Q05895 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14□□□□□ -0.17
Thbs3Q05895 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC14□□□□□ -0.17
Thbs3Q05895 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Thbs3Q05895 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC14□□□□□ -0.17
Thbs3Q05895 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14□□□□□ -0.17
Thbs3Q05895 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Thbs3Q05895 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14□□□□□ -0.17
Thbs3Q05895 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Thbs3Q05895 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Thbs3Q05895 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Thbs3Q05895 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Thbs3Q05895 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC14□□□□□ -0.17
Thbs3Q05895 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Thbs3Q05895 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC14□□□□□ -0.17
Thbs3Q05895 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Thbs3Q05895 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC14□□□□□ -0.17
Thbs3Q05895 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Thbs3Q05895 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Thbs3Q05895 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Thbs3Q05895 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Thbs3Q05895 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Thbs3Q05895 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Thbs3Q05895 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Thbs3Q05895 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC14□□□□□ -0.17
Thbs3Q05895 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14□□□□□ -0.17
Thbs3Q05895 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Thbs3Q05895 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Thbs3Q05895 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Thbs3Q05895 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Thbs3Q05895 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Thbs3Q05895 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Thbs3Q05895 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Thbs3Q05895 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Thbs3Q05895 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Thbs3Q05895 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC13.99□□□□□ -0.17
Thbs3Q05895 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Thbs3Q05895 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Thbs3Q05895 Gm21362-201ENSMUST00000194272 928 ntBASIC13.99□□□□□ -0.17
Thbs3Q05895 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Thbs3Q05895 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Thbs3Q05895 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Thbs3Q05895 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Thbs3Q05895 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Thbs3Q05895 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms