Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col10a1Q05306 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.73□□□□□ -0.05
Col10a1Q05306 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col10a1Q05306 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col10a1Q05306 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col10a1Q05306 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col10a1Q05306 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Col10a1Q05306 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col10a1Q05306 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col10a1Q05306 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Col10a1Q05306 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col10a1Q05306 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col10a1Q05306 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col10a1Q05306 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.72□□□□□ -0.05
Col10a1Q05306 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col10a1Q05306 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col10a1Q05306 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col10a1Q05306 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Col10a1Q05306 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col10a1Q05306 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col10a1Q05306 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col10a1Q05306 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col10a1Q05306 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col10a1Q05306 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col10a1Q05306 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col10a1Q05306 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col10a1Q05306 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Col10a1Q05306 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col10a1Q05306 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col10a1Q05306 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col10a1Q05306 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col10a1Q05306 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC14.72□□□□□ -0.05
Col10a1Q05306 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC14.72□□□□□ -0.05
Col10a1Q05306 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col10a1Q05306 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col10a1Q05306 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC14.72□□□□□ -0.05
Col10a1Q05306 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col10a1Q05306 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col10a1Q05306 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.72□□□□□ -0.05
Col10a1Q05306 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col10a1Q05306 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col10a1Q05306 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col10a1Q05306 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col10a1Q05306 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC14.72□□□□□ -0.05
Col10a1Q05306 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col10a1Q05306 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.71□□□□□ -0.05
Col10a1Q05306 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
Col10a1Q05306 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col10a1Q05306 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col10a1Q05306 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col10a1Q05306 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col10a1Q05306 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col10a1Q05306 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
Col10a1Q05306 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Col10a1Q05306 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col10a1Q05306 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC14.71□□□□□ -0.05
Col10a1Q05306 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col10a1Q05306 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Col10a1Q05306 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC14.71□□□□□ -0.05
Col10a1Q05306 Gm44454-201ENSMUST00000198541 138 ntBASIC14.71□□□□□ -0.05
Col10a1Q05306 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col10a1Q05306 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col10a1Q05306 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col10a1Q05306 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Col10a1Q05306 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col10a1Q05306 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Col10a1Q05306 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col10a1Q05306 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col10a1Q05306 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.71□□□□□ -0.05
Col10a1Q05306 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Col10a1Q05306 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC14.71□□□□□ -0.06
Col10a1Q05306 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.71□□□□□ -0.06
Col10a1Q05306 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Col10a1Q05306 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Col10a1Q05306 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Col10a1Q05306 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Col10a1Q05306 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col10a1Q05306 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Col10a1Q05306 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC14.7□□□□□ -0.06
Col10a1Q05306 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col10a1Q05306 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col10a1Q05306 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col10a1Q05306 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col10a1Q05306 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Col10a1Q05306 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col10a1Q05306 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC14.7□□□□□ -0.06
Col10a1Q05306 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC14.7□□□□□ -0.06
Col10a1Q05306 Gm28033-201ENSMUST00000184224 96 ntBASIC14.7□□□□□ -0.06
Col10a1Q05306 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Col10a1Q05306 AC153889.1-201ENSMUST00000219257 330 ntBASIC14.7□□□□□ -0.06
Col10a1Q05306 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC14.7□□□□□ -0.06
Col10a1Q05306 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col10a1Q05306 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC14.7□□□□□ -0.06
Col10a1Q05306 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Col10a1Q05306 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col10a1Q05306 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col10a1Q05306 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
Col10a1Q05306 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col10a1Q05306 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col10a1Q05306 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms