Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smarcc1P97496 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Smarcc1P97496 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC19.91■□□□□ 0.78
Smarcc1P97496 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
Smarcc1P97496 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smarcc1P97496 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smarcc1P97496 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smarcc1P97496 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smarcc1P97496 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smarcc1P97496 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smarcc1P97496 Gm18489-201ENSMUST00000172565 551 ntBASIC19.91■□□□□ 0.78
Smarcc1P97496 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Smarcc1P97496 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smarcc1P97496 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC19.91■□□□□ 0.78
Smarcc1P97496 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smarcc1P97496 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smarcc1P97496 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smarcc1P97496 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Smarcc1P97496 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Smarcc1P97496 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smarcc1P97496 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smarcc1P97496 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Smarcc1P97496 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smarcc1P97496 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Smarcc1P97496 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC19.91■□□□□ 0.78
Smarcc1P97496 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC19.91■□□□□ 0.78
Smarcc1P97496 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smarcc1P97496 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smarcc1P97496 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
Smarcc1P97496 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smarcc1P97496 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smarcc1P97496 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smarcc1P97496 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Smarcc1P97496 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC19.9■□□□□ 0.78
Smarcc1P97496 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Smarcc1P97496 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC19.9■□□□□ 0.78
Smarcc1P97496 Gm27321-201ENSMUST00000185021 205 ntBASIC19.9■□□□□ 0.78
Smarcc1P97496 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC19.9■□□□□ 0.78
Smarcc1P97496 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smarcc1P97496 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC19.9■□□□□ 0.78
Smarcc1P97496 Gm5186-201ENSMUST00000218781 920 ntBASIC19.9■□□□□ 0.78
Smarcc1P97496 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Smarcc1P97496 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Smarcc1P97496 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Smarcc1P97496 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smarcc1P97496 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smarcc1P97496 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Smarcc1P97496 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smarcc1P97496 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Smarcc1P97496 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smarcc1P97496 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smarcc1P97496 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smarcc1P97496 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smarcc1P97496 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
Smarcc1P97496 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
Smarcc1P97496 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smarcc1P97496 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smarcc1P97496 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smarcc1P97496 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smarcc1P97496 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
Smarcc1P97496 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smarcc1P97496 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Smarcc1P97496 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smarcc1P97496 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smarcc1P97496 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smarcc1P97496 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smarcc1P97496 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smarcc1P97496 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smarcc1P97496 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smarcc1P97496 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smarcc1P97496 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC19.89■□□□□ 0.77
Smarcc1P97496 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smarcc1P97496 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Smarcc1P97496 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smarcc1P97496 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Smarcc1P97496 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smarcc1P97496 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smarcc1P97496 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Smarcc1P97496 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smarcc1P97496 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Smarcc1P97496 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smarcc1P97496 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smarcc1P97496 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Smarcc1P97496 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smarcc1P97496 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Smarcc1P97496 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Smarcc1P97496 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smarcc1P97496 Gm13127-201ENSMUST00000118978 1389 ntBASIC19.87■□□□□ 0.77
Smarcc1P97496 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smarcc1P97496 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Smarcc1P97496 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC19.87■□□□□ 0.77
Smarcc1P97496 Gm44335-201ENSMUST00000196879 141 ntBASIC19.87■□□□□ 0.77
Smarcc1P97496 Gm44297-201ENSMUST00000198304 141 ntBASIC19.87■□□□□ 0.77
Smarcc1P97496 Gm44346-201ENSMUST00000198851 141 ntBASIC19.87■□□□□ 0.77
Smarcc1P97496 Gm5312-201ENSMUST00000203728 547 ntBASIC19.87■□□□□ 0.77
Smarcc1P97496 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Smarcc1P97496 Gm45747-201ENSMUST00000212203 999 ntBASIC19.87■□□□□ 0.77
Smarcc1P97496 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smarcc1P97496 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC19.87■□□□□ 0.77
Smarcc1P97496 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms