Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CiitaP79621 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.28■□□□□ 0.36
CiitaP79621 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CiitaP79621 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CiitaP79621 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CiitaP79621 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CiitaP79621 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CiitaP79621 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CiitaP79621 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CiitaP79621 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CiitaP79621 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CiitaP79621 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CiitaP79621 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CiitaP79621 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
CiitaP79621 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CiitaP79621 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC17.27■□□□□ 0.36
CiitaP79621 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CiitaP79621 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CiitaP79621 Gm6257-201ENSMUST00000163864 910 ntBASIC17.27■□□□□ 0.36
CiitaP79621 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CiitaP79621 Mir5126-201ENSMUST00000175513 77 ntBASIC17.27■□□□□ 0.36
CiitaP79621 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CiitaP79621 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CiitaP79621 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
CiitaP79621 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CiitaP79621 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CiitaP79621 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CiitaP79621 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC17.27■□□□□ 0.35
CiitaP79621 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CiitaP79621 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CiitaP79621 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CiitaP79621 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CiitaP79621 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CiitaP79621 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CiitaP79621 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CiitaP79621 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CiitaP79621 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CiitaP79621 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC17.26■□□□□ 0.35
CiitaP79621 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC17.26■□□□□ 0.35
CiitaP79621 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC17.26■□□□□ 0.35
CiitaP79621 Gm6443-201ENSMUST00000203599 874 ntBASIC17.26■□□□□ 0.35
CiitaP79621 AC138767.1-201ENSMUST00000222661 415 ntBASIC17.26■□□□□ 0.35
CiitaP79621 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC17.26■□□□□ 0.35
CiitaP79621 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CiitaP79621 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CiitaP79621 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CiitaP79621 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CiitaP79621 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CiitaP79621 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CiitaP79621 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CiitaP79621 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CiitaP79621 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CiitaP79621 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CiitaP79621 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CiitaP79621 Gm3928-201ENSMUST00000121141 1307 ntBASIC17.25■□□□□ 0.35
CiitaP79621 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CiitaP79621 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CiitaP79621 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.25■□□□□ 0.35
CiitaP79621 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CiitaP79621 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CiitaP79621 Gm27646-201ENSMUST00000183989 110 ntBASIC17.25■□□□□ 0.35
CiitaP79621 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC17.25■□□□□ 0.35
CiitaP79621 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC17.25■□□□□ 0.35
CiitaP79621 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CiitaP79621 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
CiitaP79621 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC17.25■□□□□ 0.35
CiitaP79621 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CiitaP79621 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CiitaP79621 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CiitaP79621 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.25■□□□□ 0.35
CiitaP79621 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
CiitaP79621 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CiitaP79621 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CiitaP79621 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CiitaP79621 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
CiitaP79621 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CiitaP79621 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CiitaP79621 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CiitaP79621 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CiitaP79621 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CiitaP79621 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CiitaP79621 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CiitaP79621 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CiitaP79621 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CiitaP79621 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CiitaP79621 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CiitaP79621 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CiitaP79621 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CiitaP79621 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CiitaP79621 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CiitaP79621 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CiitaP79621 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CiitaP79621 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CiitaP79621 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC17.24■□□□□ 0.35
CiitaP79621 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CiitaP79621 Gm6550-201ENSMUST00000187574 993 ntBASIC17.24■□□□□ 0.35
CiitaP79621 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CiitaP79621 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC17.24■□□□□ 0.35
CiitaP79621 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CiitaP79621 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms