Protein–RNA interactions for Protein: P70398

Usp9x, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, mousemouse

Known RBP Predictions only

Length 2,559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp9xP70398 Gm15191-201ENSMUST00000117933 1000 ntBASIC13.18□□□□□ -0.3
Usp9xP70398 Gm12182-201ENSMUST00000118655 1008 ntBASIC13.18□□□□□ -0.3
Usp9xP70398 Gm13882-201ENSMUST00000120886 1002 ntBASIC13.18□□□□□ -0.3
Usp9xP70398 Gm10284-201ENSMUST00000145057 1005 ntBASIC13.18□□□□□ -0.3
Usp9xP70398 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Usp9xP70398 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Usp9xP70398 Gm10481-201ENSMUST00000179228 1002 ntBASIC13.18□□□□□ -0.3
Usp9xP70398 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC13.18□□□□□ -0.3
Usp9xP70398 Gm2574-201ENSMUST00000181051 1002 ntBASIC13.18□□□□□ -0.3
Usp9xP70398 Gm3200-201ENSMUST00000181493 1002 ntBASIC13.18□□□□□ -0.3
Usp9xP70398 Gm4518-201ENSMUST00000182638 718 ntBASIC13.18□□□□□ -0.3
Usp9xP70398 Gm8330-201ENSMUST00000182754 1008 ntBASIC13.18□□□□□ -0.3
Usp9xP70398 Gm4575-201ENSMUST00000182991 1002 ntBASIC13.18□□□□□ -0.3
Usp9xP70398 Gm8709-201ENSMUST00000183230 1012 ntBASIC13.18□□□□□ -0.3
Usp9xP70398 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Usp9xP70398 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Usp9xP70398 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp9xP70398 Gm10293-201ENSMUST00000076317 1002 ntBASIC13.18□□□□□ -0.3
Usp9xP70398 Gm6316-201ENSMUST00000082064 1020 ntBASIC13.18□□□□□ -0.3
Usp9xP70398 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp9xP70398 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Usp9xP70398 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Usp9xP70398 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp9xP70398 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp9xP70398 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp9xP70398 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Usp9xP70398 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Usp9xP70398 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC13.18□□□□□ -0.3
Usp9xP70398 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp9xP70398 Gm36967-201ENSMUST00000193814 266 ntBASIC13.18□□□□□ -0.3
Usp9xP70398 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp9xP70398 Gm5779-201ENSMUST00000218467 910 ntBASIC13.18□□□□□ -0.3
Usp9xP70398 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp9xP70398 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp9xP70398 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Usp9xP70398 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Usp9xP70398 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Usp9xP70398 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Usp9xP70398 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp9xP70398 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp9xP70398 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp9xP70398 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp9xP70398 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Usp9xP70398 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp9xP70398 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC13.17□□□□□ -0.3
Usp9xP70398 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Usp9xP70398 Gm9385-201ENSMUST00000117563 472 ntBASIC13.17□□□□□ -0.3
Usp9xP70398 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Usp9xP70398 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp9xP70398 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp9xP70398 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.17□□□□□ -0.3
Usp9xP70398 AC159621.2-201ENSMUST00000223519 1326 ntBASIC13.17□□□□□ -0.3
Usp9xP70398 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC13.17□□□□□ -0.3
Usp9xP70398 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Usp9xP70398 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp9xP70398 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp9xP70398 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp9xP70398 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Usp9xP70398 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Usp9xP70398 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC13.17□□□□□ -0.3
Usp9xP70398 Gm9682-201ENSMUST00000197505 556 ntBASIC13.17□□□□□ -0.3
Usp9xP70398 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp9xP70398 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp9xP70398 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Usp9xP70398 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Usp9xP70398 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp9xP70398 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp9xP70398 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC13.16□□□□□ -0.3
Usp9xP70398 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Usp9xP70398 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.16□□□□□ -0.3
Usp9xP70398 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.16□□□□□ -0.3
Usp9xP70398 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC13.16□□□□□ -0.3
Usp9xP70398 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Usp9xP70398 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp9xP70398 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp9xP70398 Gm13294-201ENSMUST00000121757 1330 ntBASIC13.16□□□□□ -0.3
Usp9xP70398 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp9xP70398 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Usp9xP70398 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC13.16□□□□□ -0.3
Usp9xP70398 Gm17837-201ENSMUST00000186435 985 ntBASIC13.16□□□□□ -0.3
Usp9xP70398 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC13.16□□□□□ -0.3
Usp9xP70398 Gm43630-201ENSMUST00000201550 776 ntBASIC13.16□□□□□ -0.3
Usp9xP70398 AC117588.1-201ENSMUST00000228510 999 ntBASIC13.16□□□□□ -0.3
Usp9xP70398 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Usp9xP70398 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp9xP70398 Gm11620-201ENSMUST00000118770 1845 ntBASIC13.16□□□□□ -0.3
Usp9xP70398 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Usp9xP70398 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Usp9xP70398 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Usp9xP70398 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC13.15□□□□□ -0.3
Usp9xP70398 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Usp9xP70398 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Usp9xP70398 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Usp9xP70398 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.15□□□□□ -0.3
Usp9xP70398 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Usp9xP70398 Cdk7-205ENSMUST00000225990 1159 ntBASIC13.15□□□□□ -0.3
Usp9xP70398 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC13.15□□□□□ -0.3
Usp9xP70398 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Usp9xP70398 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Usp9xP70398 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms