Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Shox2P70390 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Shox2P70390 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Shox2P70390 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Shox2P70390 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Shox2P70390 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Shox2P70390 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Shox2P70390 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Shox2P70390 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Shox2P70390 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Shox2P70390 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Shox2P70390 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Shox2P70390 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Shox2P70390 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Shox2P70390 Gm12620-201ENSMUST00000119791 1986 ntBASIC15.84■□□□□ 0.13
Shox2P70390 Gm12612-201ENSMUST00000140182 1986 ntBASIC15.84■□□□□ 0.13
Shox2P70390 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Shox2P70390 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Shox2P70390 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.84■□□□□ 0.13
Shox2P70390 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Shox2P70390 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC15.84■□□□□ 0.13
Shox2P70390 Gm13158-201ENSMUST00000122007 736 ntBASIC15.84■□□□□ 0.13
Shox2P70390 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC15.84■□□□□ 0.13
Shox2P70390 Gm42642-201ENSMUST00000200683 355 ntBASIC15.84■□□□□ 0.13
Shox2P70390 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Shox2P70390 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Shox2P70390 Gm43697-201ENSMUST00000199637 2581 ntBASIC15.84■□□□□ 0.13
Shox2P70390 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Shox2P70390 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Shox2P70390 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC15.84■□□□□ 0.13
Shox2P70390 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Shox2P70390 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Shox2P70390 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Shox2P70390 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Shox2P70390 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Shox2P70390 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Shox2P70390 Efs-202ENSMUST00000227037 2540 ntBASIC15.84■□□□□ 0.13
Shox2P70390 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC15.84■□□□□ 0.13
Shox2P70390 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
Shox2P70390 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Shox2P70390 Zfp264-201ENSMUST00000208656 1563 ntBASIC15.83■□□□□ 0.13
Shox2P70390 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Shox2P70390 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Shox2P70390 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Shox2P70390 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Shox2P70390 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Shox2P70390 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Shox2P70390 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Shox2P70390 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Shox2P70390 Gm13186-201ENSMUST00000118031 316 ntBASIC15.83■□□□□ 0.12
Shox2P70390 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC15.83■□□□□ 0.12
Shox2P70390 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Shox2P70390 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.83■□□□□ 0.12
Shox2P70390 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC15.83■□□□□ 0.12
Shox2P70390 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Shox2P70390 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Shox2P70390 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Shox2P70390 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Shox2P70390 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shox2P70390 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Shox2P70390 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shox2P70390 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shox2P70390 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shox2P70390 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shox2P70390 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shox2P70390 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shox2P70390 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC15.82■□□□□ 0.12
Shox2P70390 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shox2P70390 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.82■□□□□ 0.12
Shox2P70390 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Shox2P70390 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Shox2P70390 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC15.82■□□□□ 0.12
Shox2P70390 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Shox2P70390 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Shox2P70390 Gm44672-201ENSMUST00000206944 1098 ntBASIC15.82■□□□□ 0.12
Shox2P70390 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shox2P70390 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Shox2P70390 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Shox2P70390 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shox2P70390 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Shox2P70390 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shox2P70390 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shox2P70390 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shox2P70390 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shox2P70390 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shox2P70390 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shox2P70390 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shox2P70390 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC15.82■□□□□ 0.12
Shox2P70390 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
Shox2P70390 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Shox2P70390 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Shox2P70390 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Shox2P70390 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC15.81■□□□□ 0.12
Shox2P70390 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Shox2P70390 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Shox2P70390 Gm7638-201ENSMUST00000121348 967 ntBASIC15.81■□□□□ 0.12
Shox2P70390 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Shox2P70390 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Shox2P70390 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Shox2P70390 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms