Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cks1bP61025 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Cks1bP61025 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cks1bP61025 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cks1bP61025 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cks1bP61025 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cks1bP61025 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cks1bP61025 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cks1bP61025 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cks1bP61025 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cks1bP61025 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cks1bP61025 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cks1bP61025 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cks1bP61025 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cks1bP61025 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Cks1bP61025 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cks1bP61025 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cks1bP61025 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cks1bP61025 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cks1bP61025 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cks1bP61025 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC11.41□□□□□ -0.58
Cks1bP61025 Gm43399-201ENSMUST00000202546 2374 ntBASIC11.41□□□□□ -0.58
Cks1bP61025 Mbnl2-204ENSMUST00000227012 2390 ntBASIC11.41□□□□□ -0.58
Cks1bP61025 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cks1bP61025 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cks1bP61025 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cks1bP61025 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cks1bP61025 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cks1bP61025 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cks1bP61025 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cks1bP61025 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cks1bP61025 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cks1bP61025 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cks1bP61025 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cks1bP61025 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Cks1bP61025 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cks1bP61025 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cks1bP61025 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC11.41□□□□□ -0.58
Cks1bP61025 Gm2559-201ENSMUST00000201323 363 ntBASIC11.41□□□□□ -0.58
Cks1bP61025 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC11.41□□□□□ -0.58
Cks1bP61025 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cks1bP61025 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cks1bP61025 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Cks1bP61025 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Cks1bP61025 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cks1bP61025 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cks1bP61025 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cks1bP61025 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cks1bP61025 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cks1bP61025 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cks1bP61025 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC11.41□□□□□ -0.58
Cks1bP61025 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cks1bP61025 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cks1bP61025 Ntrk2-205ENSMUST00000224402 2284 ntBASIC11.4□□□□□ -0.58
Cks1bP61025 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cks1bP61025 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cks1bP61025 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cks1bP61025 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cks1bP61025 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cks1bP61025 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cks1bP61025 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cks1bP61025 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cks1bP61025 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cks1bP61025 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cks1bP61025 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Cks1bP61025 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cks1bP61025 Gm8839-201ENSMUST00000121279 1645 ntBASIC11.4□□□□□ -0.58
Cks1bP61025 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cks1bP61025 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cks1bP61025 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Cks1bP61025 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC11.4□□□□□ -0.58
Cks1bP61025 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cks1bP61025 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cks1bP61025 Gm26524-201ENSMUST00000192339 390 ntBASIC11.4□□□□□ -0.58
Cks1bP61025 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC11.4□□□□□ -0.58
Cks1bP61025 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cks1bP61025 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cks1bP61025 Mtag2-201ENSMUST00000058665 714 ntBASIC11.4□□□□□ -0.58
Cks1bP61025 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Cks1bP61025 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Cks1bP61025 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC11.4□□□□□ -0.58
Cks1bP61025 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cks1bP61025 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Cks1bP61025 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Cks1bP61025 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Cks1bP61025 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC11.4□□□□□ -0.59
Cks1bP61025 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cks1bP61025 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC11.39□□□□□ -0.59
Cks1bP61025 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC11.39□□□□□ -0.59
Cks1bP61025 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cks1bP61025 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cks1bP61025 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC11.39□□□□□ -0.59
Cks1bP61025 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cks1bP61025 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cks1bP61025 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cks1bP61025 Ksr1-207ENSMUST00000226282 5260 ntBASIC11.39□□□□□ -0.59
Cks1bP61025 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cks1bP61025 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Cks1bP61025 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Cks1bP61025 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms