Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tpm1P58771 Sybu-209ENSMUST00000228639 4113 ntBASIC17.84■□□□□ 0.45
Tpm1P58771 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tpm1P58771 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tpm1P58771 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Tpm1P58771 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC17.84■□□□□ 0.45
Tpm1P58771 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.84■□□□□ 0.45
Tpm1P58771 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tpm1P58771 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Tpm1P58771 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tpm1P58771 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Tpm1P58771 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tpm1P58771 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Tpm1P58771 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tpm1P58771 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tpm1P58771 Gm42473-201ENSMUST00000201056 2291 ntBASIC17.84■□□□□ 0.45
Tpm1P58771 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Tpm1P58771 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tpm1P58771 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Tpm1P58771 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tpm1P58771 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tpm1P58771 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Tpm1P58771 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Tpm1P58771 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Tpm1P58771 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tpm1P58771 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tpm1P58771 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Tpm1P58771 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Tpm1P58771 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Tpm1P58771 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Tpm1P58771 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Tpm1P58771 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Tpm1P58771 Gm38042-201ENSMUST00000191614 5208 ntBASIC17.83■□□□□ 0.44
Tpm1P58771 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Tpm1P58771 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.83■□□□□ 0.44
Tpm1P58771 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.83■□□□□ 0.44
Tpm1P58771 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.83■□□□□ 0.44
Tpm1P58771 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.83■□□□□ 0.44
Tpm1P58771 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.83■□□□□ 0.44
Tpm1P58771 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tpm1P58771 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC17.83■□□□□ 0.44
Tpm1P58771 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC17.83■□□□□ 0.44
Tpm1P58771 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tpm1P58771 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tpm1P58771 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tpm1P58771 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tpm1P58771 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
Tpm1P58771 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tpm1P58771 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Tpm1P58771 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Tpm1P58771 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tpm1P58771 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tpm1P58771 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Tpm1P58771 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tpm1P58771 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Tpm1P58771 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Tpm1P58771 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Tpm1P58771 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tpm1P58771 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Tpm1P58771 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tpm1P58771 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
Tpm1P58771 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC17.82■□□□□ 0.44
Tpm1P58771 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tpm1P58771 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tpm1P58771 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
Tpm1P58771 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC17.82■□□□□ 0.44
Tpm1P58771 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC17.82■□□□□ 0.44
Tpm1P58771 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tpm1P58771 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC17.81■□□□□ 0.44
Tpm1P58771 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Tpm1P58771 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tpm1P58771 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Tpm1P58771 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tpm1P58771 Mir1199-201ENSMUST00000117015 119 ntBASIC17.81■□□□□ 0.44
Tpm1P58771 Gm13186-201ENSMUST00000118031 316 ntBASIC17.81■□□□□ 0.44
Tpm1P58771 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.81■□□□□ 0.44
Tpm1P58771 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.81■□□□□ 0.44
Tpm1P58771 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.81■□□□□ 0.44
Tpm1P58771 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.81■□□□□ 0.44
Tpm1P58771 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.81■□□□□ 0.44
Tpm1P58771 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.81■□□□□ 0.44
Tpm1P58771 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Tpm1P58771 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tpm1P58771 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
Tpm1P58771 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tpm1P58771 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC17.81■□□□□ 0.44
Tpm1P58771 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tpm1P58771 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tpm1P58771 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tpm1P58771 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tpm1P58771 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tpm1P58771 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tpm1P58771 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tpm1P58771 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tpm1P58771 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Tpm1P58771 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tpm1P58771 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Tpm1P58771 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tpm1P58771 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tpm1P58771 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms