Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nub1P54729 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nub1P54729 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nub1P54729 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nub1P54729 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nub1P54729 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nub1P54729 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Nub1P54729 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nub1P54729 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Nub1P54729 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nub1P54729 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Nub1P54729 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nub1P54729 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nub1P54729 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC17.18■□□□□ 0.34
Nub1P54729 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nub1P54729 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Nub1P54729 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC17.18■□□□□ 0.34
Nub1P54729 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nub1P54729 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.18■□□□□ 0.34
Nub1P54729 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nub1P54729 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC17.18■□□□□ 0.34
Nub1P54729 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC17.18■□□□□ 0.34
Nub1P54729 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC17.18■□□□□ 0.34
Nub1P54729 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nub1P54729 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Nub1P54729 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nub1P54729 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC17.18■□□□□ 0.34
Nub1P54729 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Nub1P54729 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nub1P54729 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nub1P54729 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nub1P54729 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Nub1P54729 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nub1P54729 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nub1P54729 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nub1P54729 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Nub1P54729 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Nub1P54729 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Nub1P54729 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nub1P54729 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC17.17■□□□□ 0.34
Nub1P54729 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nub1P54729 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nub1P54729 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nub1P54729 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Nub1P54729 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Nub1P54729 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.17■□□□□ 0.34
Nub1P54729 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.17■□□□□ 0.34
Nub1P54729 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.17■□□□□ 0.34
Nub1P54729 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC17.17■□□□□ 0.34
Nub1P54729 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nub1P54729 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nub1P54729 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
Nub1P54729 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nub1P54729 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nub1P54729 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nub1P54729 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nub1P54729 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nub1P54729 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nub1P54729 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nub1P54729 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nub1P54729 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nub1P54729 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nub1P54729 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nub1P54729 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Nub1P54729 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Nub1P54729 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nub1P54729 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nub1P54729 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Nub1P54729 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Nub1P54729 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nub1P54729 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Nub1P54729 Gm10819-201ENSMUST00000099988 561 ntBASIC17.16■□□□□ 0.34
Nub1P54729 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nub1P54729 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC17.16■□□□□ 0.34
Nub1P54729 Dancr-204ENSMUST00000132389 2347 ntBASIC17.16■□□□□ 0.34
Nub1P54729 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nub1P54729 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nub1P54729 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nub1P54729 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC17.16■□□□□ 0.34
Nub1P54729 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nub1P54729 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Nub1P54729 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.16■□□□□ 0.34
Nub1P54729 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nub1P54729 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Nub1P54729 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nub1P54729 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nub1P54729 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nub1P54729 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nub1P54729 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Nub1P54729 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Nub1P54729 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC17.15■□□□□ 0.34
Nub1P54729 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Nub1P54729 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nub1P54729 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.15■□□□□ 0.34
Nub1P54729 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Nub1P54729 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.15■□□□□ 0.34
Nub1P54729 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Nub1P54729 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nub1P54729 AC124569.2-201ENSMUST00000225998 818 ntBASIC17.15■□□□□ 0.34
Nub1P54729 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms