Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Msh6P54276 Gm10284-201ENSMUST00000145057 1005 ntBASIC20.14■□□□□ 0.81
Msh6P54276 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Msh6P54276 Gm4899-201ENSMUST00000178708 719 ntBASIC20.14■□□□□ 0.81
Msh6P54276 Gm10481-201ENSMUST00000179228 1002 ntBASIC20.14■□□□□ 0.81
Msh6P54276 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC20.14■□□□□ 0.81
Msh6P54276 Gm2574-201ENSMUST00000181051 1002 ntBASIC20.14■□□□□ 0.81
Msh6P54276 Gm3200-201ENSMUST00000181493 1002 ntBASIC20.14■□□□□ 0.81
Msh6P54276 Gm8825-201ENSMUST00000182565 998 ntBASIC20.14■□□□□ 0.81
Msh6P54276 Gm4518-201ENSMUST00000182638 718 ntBASIC20.14■□□□□ 0.81
Msh6P54276 Gm8330-201ENSMUST00000182754 1008 ntBASIC20.14■□□□□ 0.81
Msh6P54276 Gm4575-201ENSMUST00000182991 1002 ntBASIC20.14■□□□□ 0.81
Msh6P54276 Gm8709-201ENSMUST00000183230 1012 ntBASIC20.14■□□□□ 0.81
Msh6P54276 AC158982.1-201ENSMUST00000228377 901 ntBASIC20.14■□□□□ 0.81
Msh6P54276 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Msh6P54276 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Msh6P54276 Gm10293-201ENSMUST00000076317 1002 ntBASIC20.14■□□□□ 0.81
Msh6P54276 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Msh6P54276 Gm6316-201ENSMUST00000082064 1020 ntBASIC20.14■□□□□ 0.81
Msh6P54276 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC20.14■□□□□ 0.81
Msh6P54276 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Msh6P54276 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Msh6P54276 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Msh6P54276 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Msh6P54276 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Msh6P54276 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Msh6P54276 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Msh6P54276 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Msh6P54276 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC20.14■□□□□ 0.81
Msh6P54276 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Msh6P54276 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Msh6P54276 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Msh6P54276 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Msh6P54276 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Msh6P54276 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC20.13■□□□□ 0.81
Msh6P54276 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Msh6P54276 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Msh6P54276 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Msh6P54276 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Msh6P54276 Gm28265-201ENSMUST00000188201 2319 ntBASIC20.13■□□□□ 0.81
Msh6P54276 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Msh6P54276 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Msh6P54276 Gm45167-201ENSMUST00000208007 322 ntBASIC20.13■□□□□ 0.81
Msh6P54276 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC20.13■□□□□ 0.81
Msh6P54276 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Msh6P54276 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Msh6P54276 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Msh6P54276 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Msh6P54276 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Msh6P54276 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC20.13■□□□□ 0.81
Msh6P54276 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Msh6P54276 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Msh6P54276 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Msh6P54276 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Msh6P54276 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Msh6P54276 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Msh6P54276 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Msh6P54276 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
Msh6P54276 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Msh6P54276 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC20.13■□□□□ 0.81
Msh6P54276 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Msh6P54276 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Msh6P54276 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Msh6P54276 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
Msh6P54276 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Msh6P54276 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
Msh6P54276 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Msh6P54276 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
Msh6P54276 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Msh6P54276 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Msh6P54276 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Msh6P54276 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC20.12■□□□□ 0.81
Msh6P54276 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC20.12■□□□□ 0.81
Msh6P54276 AC124549.3-201ENSMUST00000225541 367 ntBASIC20.12■□□□□ 0.81
Msh6P54276 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Msh6P54276 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC20.12■□□□□ 0.81
Msh6P54276 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
Msh6P54276 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Msh6P54276 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Msh6P54276 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Msh6P54276 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Msh6P54276 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Msh6P54276 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC20.11■□□□□ 0.81
Msh6P54276 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Msh6P54276 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Msh6P54276 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC20.11■□□□□ 0.81
Msh6P54276 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC20.11■□□□□ 0.81
Msh6P54276 Gm11025-201ENSMUST00000140773 466 ntBASIC20.11■□□□□ 0.81
Msh6P54276 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Msh6P54276 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Msh6P54276 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC20.11■□□□□ 0.81
Msh6P54276 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Msh6P54276 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Msh6P54276 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Msh6P54276 Gm43548-201ENSMUST00000197139 2353 ntBASIC20.11■□□□□ 0.81
Msh6P54276 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Msh6P54276 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Msh6P54276 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Msh6P54276 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Msh6P54276 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms