Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Atxn1P54254 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Atxn1P54254 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Atxn1P54254 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Atxn1P54254 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Atxn1P54254 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Atxn1P54254 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Atxn1P54254 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Atxn1P54254 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Atxn1P54254 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Atxn1P54254 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Atxn1P54254 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC15.82■□□□□ 0.12
Atxn1P54254 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Atxn1P54254 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Atxn1P54254 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Atxn1P54254 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.82■□□□□ 0.12
Atxn1P54254 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Atxn1P54254 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC15.82■□□□□ 0.12
Atxn1P54254 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC15.82■□□□□ 0.12
Atxn1P54254 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Atxn1P54254 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Atxn1P54254 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Atxn1P54254 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Atxn1P54254 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Atxn1P54254 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Atxn1P54254 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Atxn1P54254 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Atxn1P54254 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Atxn1P54254 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Atxn1P54254 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Atxn1P54254 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Atxn1P54254 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Atxn1P54254 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Atxn1P54254 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Atxn1P54254 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC15.82■□□□□ 0.12
Atxn1P54254 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Atxn1P54254 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Atxn1P54254 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Atxn1P54254 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Atxn1P54254 Haglr-201ENSMUST00000100000 2085 ntBASIC15.81■□□□□ 0.12
Atxn1P54254 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Atxn1P54254 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
Atxn1P54254 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Atxn1P54254 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC15.81■□□□□ 0.12
Atxn1P54254 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Atxn1P54254 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Atxn1P54254 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Atxn1P54254 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Atxn1P54254 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Atxn1P54254 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Atxn1P54254 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Atxn1P54254 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Atxn1P54254 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Atxn1P54254 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Atxn1P54254 Gm15500-202ENSMUST00000071641 1019 ntBASIC15.81■□□□□ 0.12
Atxn1P54254 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Atxn1P54254 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Atxn1P54254 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Atxn1P54254 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Atxn1P54254 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Atxn1P54254 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Atxn1P54254 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Atxn1P54254 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Atxn1P54254 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Atxn1P54254 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Atxn1P54254 Gm11620-201ENSMUST00000118770 1845 ntBASIC15.8■□□□□ 0.12
Atxn1P54254 Tfap2a-209ENSMUST00000225180 1828 ntBASIC15.8■□□□□ 0.12
Atxn1P54254 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Atxn1P54254 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Atxn1P54254 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Atxn1P54254 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Atxn1P54254 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Atxn1P54254 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Atxn1P54254 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Atxn1P54254 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Atxn1P54254 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
Atxn1P54254 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC15.8■□□□□ 0.12
Atxn1P54254 AC139382.1-201ENSMUST00000221402 498 ntBASIC15.8■□□□□ 0.12
Atxn1P54254 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Atxn1P54254 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Atxn1P54254 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Atxn1P54254 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Atxn1P54254 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Atxn1P54254 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Atxn1P54254 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Atxn1P54254 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Atxn1P54254 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Atxn1P54254 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Atxn1P54254 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Atxn1P54254 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Atxn1P54254 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.79■□□□□ 0.12
Atxn1P54254 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Atxn1P54254 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Atxn1P54254 Gm28265-201ENSMUST00000188201 2319 ntBASIC15.79■□□□□ 0.12
Atxn1P54254 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Atxn1P54254 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Atxn1P54254 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Atxn1P54254 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Atxn1P54254 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Atxn1P54254 Gm11780-201ENSMUST00000136880 516 ntBASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms