Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Sox3P53784 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC15.28■□□□□ 0.04
Sox3P53784 Mir5126-201ENSMUST00000175513 77 ntBASIC15.28■□□□□ 0.04
Sox3P53784 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC15.28■□□□□ 0.04
Sox3P53784 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox3P53784 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
Sox3P53784 Psmb5-202ENSMUST00000227257 622 ntBASIC15.28■□□□□ 0.04
Sox3P53784 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox3P53784 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox3P53784 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sox3P53784 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
Sox3P53784 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sox3P53784 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox3P53784 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox3P53784 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Sox3P53784 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox3P53784 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox3P53784 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC15.28■□□□□ 0.04
Sox3P53784 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
Sox3P53784 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sox3P53784 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sox3P53784 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sox3P53784 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sox3P53784 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sox3P53784 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sox3P53784 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC15.27■□□□□ 0.04
Sox3P53784 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sox3P53784 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC15.27■□□□□ 0.04
Sox3P53784 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sox3P53784 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC15.27■□□□□ 0.04
Sox3P53784 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Sox3P53784 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sox3P53784 Gm42670-201ENSMUST00000201816 1292 ntBASIC15.27■□□□□ 0.04
Sox3P53784 Gm5186-201ENSMUST00000218781 920 ntBASIC15.27■□□□□ 0.04
Sox3P53784 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sox3P53784 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sox3P53784 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sox3P53784 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sox3P53784 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
Sox3P53784 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.27■□□□□ 0.03
Sox3P53784 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sox3P53784 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sox3P53784 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Sox3P53784 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Sox3P53784 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Sox3P53784 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sox3P53784 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sox3P53784 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sox3P53784 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC15.27■□□□□ 0.03
Sox3P53784 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Sox3P53784 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sox3P53784 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sox3P53784 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sox3P53784 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox3P53784 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.26■□□□□ 0.03
Sox3P53784 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.26■□□□□ 0.03
Sox3P53784 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox3P53784 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Sox3P53784 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox3P53784 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox3P53784 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.26■□□□□ 0.03
Sox3P53784 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox3P53784 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox3P53784 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox3P53784 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sox3P53784 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox3P53784 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sox3P53784 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
Sox3P53784 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Sox3P53784 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC15.26■□□□□ 0.03
Sox3P53784 Gm13830-205ENSMUST00000201195 1155 ntBASIC15.26■□□□□ 0.03
Sox3P53784 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox3P53784 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox3P53784 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox3P53784 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox3P53784 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Sox3P53784 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Sox3P53784 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Sox3P53784 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox3P53784 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox3P53784 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Sox3P53784 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC15.26■□□□□ 0.03
Sox3P53784 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox3P53784 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox3P53784 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox3P53784 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sox3P53784 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox3P53784 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox3P53784 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox3P53784 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox3P53784 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox3P53784 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC15.25■□□□□ 0.03
Sox3P53784 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox3P53784 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sox3P53784 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sox3P53784 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC15.25■□□□□ 0.03
Sox3P53784 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox3P53784 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Sox3P53784 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sox3P53784 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms