Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox1P53783 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox1P53783 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sox1P53783 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox1P53783 Gm11453-201ENSMUST00000117318 1007 ntBASIC16.28■□□□□ 0.2
Sox1P53783 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC16.28■□□□□ 0.2
Sox1P53783 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC16.28■□□□□ 0.2
Sox1P53783 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox1P53783 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sox1P53783 Gm9899-201ENSMUST00000065519 555 ntBASIC16.28■□□□□ 0.2
Sox1P53783 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox1P53783 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox1P53783 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox1P53783 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox1P53783 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox1P53783 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox1P53783 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox1P53783 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sox1P53783 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sox1P53783 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
Sox1P53783 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sox1P53783 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sox1P53783 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Sox1P53783 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Sox1P53783 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Sox1P53783 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sox1P53783 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
Sox1P53783 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sox1P53783 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC16.27■□□□□ 0.2
Sox1P53783 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC16.27■□□□□ 0.2
Sox1P53783 Gm6912-201ENSMUST00000117218 544 ntBASIC16.27■□□□□ 0.2
Sox1P53783 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC16.27■□□□□ 0.2
Sox1P53783 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC16.27■□□□□ 0.2
Sox1P53783 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sox1P53783 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.27■□□□□ 0.2
Sox1P53783 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sox1P53783 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sox1P53783 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
Sox1P53783 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sox1P53783 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.27■□□□□ 0.19
Sox1P53783 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sox1P53783 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Sox1P53783 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Sox1P53783 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Sox1P53783 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox1P53783 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox1P53783 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox1P53783 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox1P53783 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox1P53783 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Sox1P53783 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox1P53783 Gm15163-201ENSMUST00000120749 1302 ntBASIC16.26■□□□□ 0.19
Sox1P53783 Gm5366-201ENSMUST00000215494 1338 ntBASIC16.26■□□□□ 0.19
Sox1P53783 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox1P53783 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox1P53783 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox1P53783 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox1P53783 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox1P53783 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.26■□□□□ 0.19
Sox1P53783 Gm38318-201ENSMUST00000195769 1706 ntBASIC16.26■□□□□ 0.19
Sox1P53783 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Sox1P53783 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox1P53783 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
Sox1P53783 Rpph1-201ENSMUST00000175096 319 ntBASIC16.26■□□□□ 0.19
Sox1P53783 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Sox1P53783 Gm17837-201ENSMUST00000186435 985 ntBASIC16.26■□□□□ 0.19
Sox1P53783 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC16.26■□□□□ 0.19
Sox1P53783 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Sox1P53783 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox1P53783 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox1P53783 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Sox1P53783 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox1P53783 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox1P53783 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Sox1P53783 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox1P53783 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox1P53783 AC126250.1-201ENSMUST00000228343 1768 ntBASIC16.26■□□□□ 0.19
Sox1P53783 Syt7-205ENSMUST00000224135 1557 ntBASIC16.26■□□□□ 0.19
Sox1P53783 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Sox1P53783 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sox1P53783 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Sox1P53783 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.25■□□□□ 0.19
Sox1P53783 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sox1P53783 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sox1P53783 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sox1P53783 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sox1P53783 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sox1P53783 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sox1P53783 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sox1P53783 Gm13294-201ENSMUST00000121757 1330 ntBASIC16.25■□□□□ 0.19
Sox1P53783 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Sox1P53783 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sox1P53783 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sox1P53783 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sox1P53783 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sox1P53783 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sox1P53783 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Sox1P53783 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sox1P53783 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sox1P53783 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms