Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Brca1P48754 Gm20553-201ENSMUST00000204205 844 ntBASIC17.82■□□□□ 0.44
Brca1P48754 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC17.82■□□□□ 0.44
Brca1P48754 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Brca1P48754 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Brca1P48754 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Brca1P48754 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Brca1P48754 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Brca1P48754 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Brca1P48754 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
Brca1P48754 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Brca1P48754 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Brca1P48754 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
Brca1P48754 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
Brca1P48754 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Brca1P48754 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Brca1P48754 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.82■□□□□ 0.44
Brca1P48754 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.82■□□□□ 0.44
Brca1P48754 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Brca1P48754 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.82■□□□□ 0.44
Brca1P48754 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
Brca1P48754 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Brca1P48754 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Brca1P48754 Nudt18-203ENSMUST00000228768 1578 ntBASIC17.81■□□□□ 0.44
Brca1P48754 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Brca1P48754 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Brca1P48754 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Brca1P48754 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.81■□□□□ 0.44
Brca1P48754 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Brca1P48754 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Brca1P48754 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Brca1P48754 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.8■□□□□ 0.44
Brca1P48754 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Brca1P48754 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Brca1P48754 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Brca1P48754 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC17.8■□□□□ 0.44
Brca1P48754 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Brca1P48754 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Brca1P48754 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Brca1P48754 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Brca1P48754 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Brca1P48754 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Brca1P48754 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Brca1P48754 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Brca1P48754 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Brca1P48754 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
Brca1P48754 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.8■□□□□ 0.44
Brca1P48754 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Brca1P48754 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Brca1P48754 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
Brca1P48754 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.8■□□□□ 0.44
Brca1P48754 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Brca1P48754 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Brca1P48754 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Brca1P48754 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Brca1P48754 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.79■□□□□ 0.44
Brca1P48754 Wnt10b-206ENSMUST00000228546 2709 ntBASIC17.79■□□□□ 0.44
Brca1P48754 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC17.79■□□□□ 0.44
Brca1P48754 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Brca1P48754 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Brca1P48754 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Brca1P48754 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Brca1P48754 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Brca1P48754 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
Brca1P48754 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Brca1P48754 H2-Pa-201ENSMUST00000182803 626 ntBASIC17.79■□□□□ 0.44
Brca1P48754 Gm27437-201ENSMUST00000183429 107 ntBASIC17.79■□□□□ 0.44
Brca1P48754 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Brca1P48754 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Brca1P48754 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Brca1P48754 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Brca1P48754 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Brca1P48754 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Brca1P48754 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Brca1P48754 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Brca1P48754 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Brca1P48754 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Brca1P48754 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Brca1P48754 Gm13223-201ENSMUST00000118609 747 ntBASIC17.78■□□□□ 0.44
Brca1P48754 Gm16198-201ENSMUST00000118766 670 ntBASIC17.78■□□□□ 0.44
Brca1P48754 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC17.78■□□□□ 0.44
Brca1P48754 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC17.78■□□□□ 0.44
Brca1P48754 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC17.78■□□□□ 0.44
Brca1P48754 Wdyhv1-203ENSMUST00000226889 394 ntBASIC17.78■□□□□ 0.44
Brca1P48754 AC126250.1-201ENSMUST00000228343 1768 ntBASIC17.78■□□□□ 0.44
Brca1P48754 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Brca1P48754 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Brca1P48754 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Brca1P48754 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Brca1P48754 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Brca1P48754 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Brca1P48754 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Brca1P48754 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Brca1P48754 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Brca1P48754 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC17.77■□□□□ 0.44
Brca1P48754 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Brca1P48754 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC17.77■□□□□ 0.44
Brca1P48754 AC151836.1-202ENSMUST00000226259 753 ntBASIC17.77■□□□□ 0.44
Brca1P48754 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Brca1P48754 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms