Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rfx3P48381 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rfx3P48381 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rfx3P48381 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Rfx3P48381 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rfx3P48381 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rfx3P48381 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.46□□□□□ -0.09
Rfx3P48381 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rfx3P48381 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Rfx3P48381 Gm6433-201ENSMUST00000118634 875 ntBASIC14.46□□□□□ -0.09
Rfx3P48381 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rfx3P48381 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rfx3P48381 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rfx3P48381 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rfx3P48381 Gm27389-201ENSMUST00000183622 195 ntBASIC14.46□□□□□ -0.09
Rfx3P48381 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Rfx3P48381 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC14.46□□□□□ -0.09
Rfx3P48381 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
Rfx3P48381 AC122351.1-201ENSMUST00000220467 126 ntBASIC14.46□□□□□ -0.09
Rfx3P48381 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rfx3P48381 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rfx3P48381 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rfx3P48381 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Rfx3P48381 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
Rfx3P48381 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rfx3P48381 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rfx3P48381 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
Rfx3P48381 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rfx3P48381 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rfx3P48381 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Rfx3P48381 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Rfx3P48381 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rfx3P48381 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Rfx3P48381 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Rfx3P48381 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.45□□□□□ -0.1
Rfx3P48381 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rfx3P48381 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC14.45□□□□□ -0.1
Rfx3P48381 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
Rfx3P48381 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rfx3P48381 Gm29707-201ENSMUST00000196325 491 ntBASIC14.45□□□□□ -0.1
Rfx3P48381 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rfx3P48381 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rfx3P48381 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rfx3P48381 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rfx3P48381 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rfx3P48381 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rfx3P48381 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rfx3P48381 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rfx3P48381 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC14.44□□□□□ -0.1
Rfx3P48381 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rfx3P48381 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rfx3P48381 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rfx3P48381 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rfx3P48381 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.44□□□□□ -0.1
Rfx3P48381 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rfx3P48381 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Rfx3P48381 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rfx3P48381 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rfx3P48381 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rfx3P48381 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rfx3P48381 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rfx3P48381 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Rfx3P48381 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC14.44□□□□□ -0.1
Rfx3P48381 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC14.44□□□□□ -0.1
Rfx3P48381 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rfx3P48381 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Rfx3P48381 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rfx3P48381 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rfx3P48381 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rfx3P48381 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rfx3P48381 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rfx3P48381 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rfx3P48381 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Rfx3P48381 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.44□□□□□ -0.1
Rfx3P48381 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rfx3P48381 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rfx3P48381 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.44□□□□□ -0.1
Rfx3P48381 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14.43□□□□□ -0.1
Rfx3P48381 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rfx3P48381 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rfx3P48381 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rfx3P48381 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rfx3P48381 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.43□□□□□ -0.1
Rfx3P48381 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rfx3P48381 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rfx3P48381 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rfx3P48381 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC14.43□□□□□ -0.1
Rfx3P48381 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
Rfx3P48381 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rfx3P48381 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Rfx3P48381 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC14.43□□□□□ -0.1
Rfx3P48381 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rfx3P48381 AC134329.2-201ENSMUST00000217897 428 ntBASIC14.43□□□□□ -0.1
Rfx3P48381 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC14.43□□□□□ -0.1
Rfx3P48381 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rfx3P48381 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rfx3P48381 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rfx3P48381 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rfx3P48381 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC14.43□□□□□ -0.1
Rfx3P48381 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms