Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sox18P43680 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sox18P43680 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sox18P43680 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sox18P43680 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sox18P43680 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sox18P43680 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sox18P43680 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sox18P43680 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC15.27■□□□□ 0.04
Sox18P43680 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC15.27■□□□□ 0.04
Sox18P43680 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sox18P43680 AC131709.1-201ENSMUST00000224731 1180 ntBASIC15.27■□□□□ 0.04
Sox18P43680 Arhgef33-209ENSMUST00000225223 714 ntBASIC15.27■□□□□ 0.04
Sox18P43680 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC15.27■□□□□ 0.04
Sox18P43680 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sox18P43680 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sox18P43680 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Sox18P43680 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Sox18P43680 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox18P43680 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox18P43680 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox18P43680 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox18P43680 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox18P43680 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox18P43680 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox18P43680 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sox18P43680 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox18P43680 Mir1895-201ENSMUST00000122615 79 ntBASIC15.26■□□□□ 0.03
Sox18P43680 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC15.26■□□□□ 0.03
Sox18P43680 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC15.26■□□□□ 0.03
Sox18P43680 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Sox18P43680 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC15.26■□□□□ 0.03
Sox18P43680 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC15.26■□□□□ 0.03
Sox18P43680 AC159106.1-201ENSMUST00000224421 690 ntBASIC15.26■□□□□ 0.03
Sox18P43680 AC159295.1-201ENSMUST00000225326 940 ntBASIC15.26■□□□□ 0.03
Sox18P43680 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox18P43680 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox18P43680 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC15.26■□□□□ 0.03
Sox18P43680 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sox18P43680 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox18P43680 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox18P43680 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC15.26■□□□□ 0.03
Sox18P43680 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Sox18P43680 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox18P43680 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Sox18P43680 AC121598.2-201ENSMUST00000228376 2325 ntBASIC15.26■□□□□ 0.03
Sox18P43680 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox18P43680 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox18P43680 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox18P43680 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC15.26■□□□□ 0.03
Sox18P43680 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox18P43680 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sox18P43680 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Sox18P43680 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sox18P43680 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC15.25■□□□□ 0.03
Sox18P43680 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox18P43680 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sox18P43680 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sox18P43680 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC15.25■□□□□ 0.03
Sox18P43680 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sox18P43680 Gm27494-201ENSMUST00000184735 189 ntBASIC15.25■□□□□ 0.03
Sox18P43680 Mir7023-201ENSMUST00000185093 64 ntBASIC15.25■□□□□ 0.03
Sox18P43680 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC15.25■□□□□ 0.03
Sox18P43680 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox18P43680 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox18P43680 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox18P43680 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox18P43680 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox18P43680 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Sox18P43680 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox18P43680 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sox18P43680 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox18P43680 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox18P43680 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox18P43680 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox18P43680 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC15.25■□□□□ 0.03
Sox18P43680 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox18P43680 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.25■□□□□ 0.03
Sox18P43680 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC15.25■□□□□ 0.03
Sox18P43680 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sox18P43680 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox18P43680 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox18P43680 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox18P43680 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sox18P43680 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
Sox18P43680 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox18P43680 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox18P43680 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox18P43680 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Sox18P43680 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox18P43680 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC15.24■□□□□ 0.03
Sox18P43680 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sox18P43680 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sox18P43680 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox18P43680 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox18P43680 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC15.24■□□□□ 0.03
Sox18P43680 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sox18P43680 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC15.24■□□□□ 0.03
Sox18P43680 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sox18P43680 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms