Protein–RNA interactions for Protein: P42581

Hmx3, Homeobox protein HMX3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmx3P42581 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hmx3P42581 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hmx3P42581 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hmx3P42581 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hmx3P42581 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hmx3P42581 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hmx3P42581 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hmx3P42581 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC13.38□□□□□ -0.27
Hmx3P42581 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC13.38□□□□□ -0.27
Hmx3P42581 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hmx3P42581 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.38□□□□□ -0.27
Hmx3P42581 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hmx3P42581 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hmx3P42581 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hmx3P42581 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Hmx3P42581 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hmx3P42581 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hmx3P42581 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hmx3P42581 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hmx3P42581 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hmx3P42581 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hmx3P42581 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Hmx3P42581 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hmx3P42581 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hmx3P42581 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hmx3P42581 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Hmx3P42581 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
Hmx3P42581 Gm12085-201ENSMUST00000119263 940 ntBASIC13.37□□□□□ -0.27
Hmx3P42581 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Hmx3P42581 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hmx3P42581 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hmx3P42581 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hmx3P42581 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hmx3P42581 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hmx3P42581 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Hmx3P42581 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hmx3P42581 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hmx3P42581 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hmx3P42581 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hmx3P42581 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hmx3P42581 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hmx3P42581 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC13.36□□□□□ -0.27
Hmx3P42581 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hmx3P42581 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hmx3P42581 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hmx3P42581 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Hmx3P42581 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Hmx3P42581 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hmx3P42581 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hmx3P42581 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hmx3P42581 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hmx3P42581 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hmx3P42581 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hmx3P42581 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Hmx3P42581 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.36□□□□□ -0.27
Hmx3P42581 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hmx3P42581 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Hmx3P42581 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hmx3P42581 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hmx3P42581 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Hmx3P42581 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hmx3P42581 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Hmx3P42581 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hmx3P42581 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Hmx3P42581 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Hmx3P42581 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC13.36□□□□□ -0.27
Hmx3P42581 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Hmx3P42581 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hmx3P42581 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Hmx3P42581 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hmx3P42581 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Hmx3P42581 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hmx3P42581 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hmx3P42581 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
Hmx3P42581 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hmx3P42581 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hmx3P42581 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Hmx3P42581 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hmx3P42581 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Hmx3P42581 Mir1199-201ENSMUST00000117015 119 ntBASIC13.35□□□□□ -0.27
Hmx3P42581 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Hmx3P42581 Gm8520-201ENSMUST00000186517 868 ntBASIC13.35□□□□□ -0.27
Hmx3P42581 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC13.35□□□□□ -0.27
Hmx3P42581 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC13.35□□□□□ -0.27
Hmx3P42581 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hmx3P42581 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hmx3P42581 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hmx3P42581 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hmx3P42581 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hmx3P42581 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hmx3P42581 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.35□□□□□ -0.27
Hmx3P42581 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Hmx3P42581 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Hmx3P42581 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Hmx3P42581 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hmx3P42581 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hmx3P42581 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hmx3P42581 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC13.35□□□□□ -0.27
Hmx3P42581 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hmx3P42581 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms