Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Abca1P41233 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Abca1P41233 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Abca1P41233 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Abca1P41233 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Abca1P41233 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Abca1P41233 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC13.27□□□□□ -0.29
Abca1P41233 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Abca1P41233 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC13.27□□□□□ -0.29
Abca1P41233 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Abca1P41233 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC13.27□□□□□ -0.29
Abca1P41233 Gm25745-201ENSMUST00000174945 133 ntBASIC13.27□□□□□ -0.29
Abca1P41233 AC154222.1-201ENSMUST00000223882 475 ntBASIC13.27□□□□□ -0.29
Abca1P41233 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Abca1P41233 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Abca1P41233 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Abca1P41233 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Abca1P41233 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Abca1P41233 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC13.26□□□□□ -0.29
Abca1P41233 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Abca1P41233 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Abca1P41233 Gm18856-201ENSMUST00000178096 1374 ntBASIC13.26□□□□□ -0.29
Abca1P41233 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Abca1P41233 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Abca1P41233 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Abca1P41233 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Abca1P41233 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Abca1P41233 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Abca1P41233 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
Abca1P41233 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC13.26□□□□□ -0.29
Abca1P41233 Gm8969-201ENSMUST00000199694 526 ntBASIC13.26□□□□□ -0.29
Abca1P41233 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Abca1P41233 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Abca1P41233 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Abca1P41233 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Abca1P41233 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Abca1P41233 Gm29340-201ENSMUST00000188763 3854 ntBASIC13.26□□□□□ -0.29
Abca1P41233 AC122901.1-201ENSMUST00000214203 1790 ntBASIC13.26□□□□□ -0.29
Abca1P41233 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Abca1P41233 Gm20628-201ENSMUST00000177363 3215 ntBASIC13.26□□□□□ -0.29
Abca1P41233 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Abca1P41233 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Abca1P41233 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Abca1P41233 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Abca1P41233 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Abca1P41233 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Abca1P41233 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Abca1P41233 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Abca1P41233 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC13.25□□□□□ -0.29
Abca1P41233 CT009713.7-201ENSMUST00000224689 571 ntBASIC13.25□□□□□ -0.29
Abca1P41233 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Abca1P41233 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Abca1P41233 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Abca1P41233 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Abca1P41233 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Abca1P41233 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Abca1P41233 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Abca1P41233 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Abca1P41233 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Abca1P41233 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Abca1P41233 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
Abca1P41233 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Abca1P41233 Gm12260-201ENSMUST00000122447 411 ntBASIC13.25□□□□□ -0.29
Abca1P41233 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
Abca1P41233 AC154757.1-201ENSMUST00000228289 336 ntBASIC13.25□□□□□ -0.29
Abca1P41233 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Abca1P41233 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Abca1P41233 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Abca1P41233 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Abca1P41233 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC13.25□□□□□ -0.29
Abca1P41233 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Abca1P41233 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Abca1P41233 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Abca1P41233 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC13.25□□□□□ -0.29
Abca1P41233 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Abca1P41233 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Abca1P41233 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Abca1P41233 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Abca1P41233 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Abca1P41233 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Abca1P41233 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Abca1P41233 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC13.24□□□□□ -0.29
Abca1P41233 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Abca1P41233 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC13.24□□□□□ -0.29
Abca1P41233 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Abca1P41233 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Abca1P41233 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Abca1P41233 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Abca1P41233 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Abca1P41233 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Abca1P41233 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC13.24□□□□□ -0.29
Abca1P41233 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Abca1P41233 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Abca1P41233 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Abca1P41233 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC13.24□□□□□ -0.29
Abca1P41233 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Abca1P41233 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Abca1P41233 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Abca1P41233 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC13.24□□□□□ -0.29
Abca1P41233 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms