Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Cxcl12P40224 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cxcl12P40224 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cxcl12P40224 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cxcl12P40224 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cxcl12P40224 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC16.42■□□□□ 0.22
Cxcl12P40224 Gm7774-201ENSMUST00000200064 533 ntBASIC16.42■□□□□ 0.22
Cxcl12P40224 Gpr146-202ENSMUST00000053120 1040 ntBASIC16.42■□□□□ 0.22
Cxcl12P40224 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Cxcl12P40224 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Cxcl12P40224 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cxcl12P40224 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC16.42■□□□□ 0.22
Cxcl12P40224 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cxcl12P40224 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Cxcl12P40224 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cxcl12P40224 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cxcl12P40224 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Cxcl12P40224 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cxcl12P40224 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cxcl12P40224 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cxcl12P40224 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cxcl12P40224 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cxcl12P40224 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Cxcl12P40224 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC16.41■□□□□ 0.22
Cxcl12P40224 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC16.41■□□□□ 0.22
Cxcl12P40224 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cxcl12P40224 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cxcl12P40224 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC16.41■□□□□ 0.22
Cxcl12P40224 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC16.41■□□□□ 0.22
Cxcl12P40224 Gm27622-201ENSMUST00000183779 60 ntBASIC16.41■□□□□ 0.22
Cxcl12P40224 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cxcl12P40224 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC16.41■□□□□ 0.22
Cxcl12P40224 Gm19164-201ENSMUST00000210667 640 ntBASIC16.41■□□□□ 0.22
Cxcl12P40224 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cxcl12P40224 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cxcl12P40224 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Cxcl12P40224 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Cxcl12P40224 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Cxcl12P40224 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cxcl12P40224 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cxcl12P40224 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cxcl12P40224 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cxcl12P40224 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cxcl12P40224 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Cxcl12P40224 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cxcl12P40224 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Cxcl12P40224 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Cxcl12P40224 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cxcl12P40224 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cxcl12P40224 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cxcl12P40224 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Cxcl12P40224 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cxcl12P40224 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC16.4■□□□□ 0.22
Cxcl12P40224 Thap2-203ENSMUST00000218989 527 ntBASIC16.4■□□□□ 0.22
Cxcl12P40224 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC16.4■□□□□ 0.22
Cxcl12P40224 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cxcl12P40224 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Cxcl12P40224 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cxcl12P40224 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cxcl12P40224 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Cxcl12P40224 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Cxcl12P40224 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Cxcl12P40224 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cxcl12P40224 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cxcl12P40224 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cxcl12P40224 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cxcl12P40224 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Cxcl12P40224 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cxcl12P40224 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Cxcl12P40224 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC16.39■□□□□ 0.21
Cxcl12P40224 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC16.39■□□□□ 0.21
Cxcl12P40224 AC126408.1-201ENSMUST00000225184 523 ntBASIC16.39■□□□□ 0.21
Cxcl12P40224 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cxcl12P40224 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cxcl12P40224 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Cxcl12P40224 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Cxcl12P40224 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cxcl12P40224 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cxcl12P40224 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cxcl12P40224 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cxcl12P40224 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cxcl12P40224 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cxcl12P40224 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cxcl12P40224 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cxcl12P40224 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cxcl12P40224 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
Cxcl12P40224 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cxcl12P40224 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC16.38■□□□□ 0.21
Cxcl12P40224 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cxcl12P40224 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cxcl12P40224 Gm20553-201ENSMUST00000204205 844 ntBASIC16.38■□□□□ 0.21
Cxcl12P40224 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC16.38■□□□□ 0.21
Cxcl12P40224 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cxcl12P40224 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cxcl12P40224 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cxcl12P40224 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cxcl12P40224 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cxcl12P40224 AC159621.2-201ENSMUST00000223519 1326 ntBASIC16.38■□□□□ 0.21
Cxcl12P40224 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cxcl12P40224 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms