Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Timp3P39876 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Timp3P39876 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Timp3P39876 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Timp3P39876 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.32
Timp3P39876 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC13.08□□□□□ -0.32
Timp3P39876 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Timp3P39876 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Timp3P39876 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Timp3P39876 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Timp3P39876 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Timp3P39876 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Timp3P39876 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC13.08□□□□□ -0.32
Timp3P39876 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Timp3P39876 Mir8098-201ENSMUST00000184011 137 ntBASIC13.08□□□□□ -0.32
Timp3P39876 Gm19430-201ENSMUST00000193847 2137 ntBASIC13.08□□□□□ -0.32
Timp3P39876 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.32
Timp3P39876 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Timp3P39876 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC13.08□□□□□ -0.32
Timp3P39876 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Timp3P39876 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC13.08□□□□□ -0.32
Timp3P39876 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Timp3P39876 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC13.08□□□□□ -0.32
Timp3P39876 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Timp3P39876 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Timp3P39876 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Timp3P39876 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Timp3P39876 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
Timp3P39876 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Timp3P39876 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC13.07□□□□□ -0.32
Timp3P39876 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Timp3P39876 Gm14026-201ENSMUST00000120625 1789 ntBASIC13.07□□□□□ -0.32
Timp3P39876 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC13.07□□□□□ -0.32
Timp3P39876 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Timp3P39876 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Timp3P39876 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Timp3P39876 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
Timp3P39876 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Timp3P39876 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Timp3P39876 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Timp3P39876 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Timp3P39876 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Timp3P39876 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC13.07□□□□□ -0.32
Timp3P39876 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC13.07□□□□□ -0.32
Timp3P39876 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Timp3P39876 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Timp3P39876 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Timp3P39876 Gfra2-202ENSMUST00000227633 1480 ntBASIC13.07□□□□□ -0.32
Timp3P39876 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Timp3P39876 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Timp3P39876 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Timp3P39876 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Timp3P39876 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Timp3P39876 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Timp3P39876 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Timp3P39876 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Timp3P39876 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC13.07□□□□□ -0.32
Timp3P39876 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Timp3P39876 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Timp3P39876 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Timp3P39876 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Timp3P39876 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Timp3P39876 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Timp3P39876 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Timp3P39876 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Timp3P39876 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC13.06□□□□□ -0.32
Timp3P39876 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Timp3P39876 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Timp3P39876 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Timp3P39876 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Timp3P39876 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC13.06□□□□□ -0.32
Timp3P39876 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
Timp3P39876 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Timp3P39876 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Timp3P39876 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC13.06□□□□□ -0.32
Timp3P39876 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC13.06□□□□□ -0.32
Timp3P39876 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Timp3P39876 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Timp3P39876 Mzt1-203ENSMUST00000227948 952 ntBASIC13.06□□□□□ -0.32
Timp3P39876 AC133083.1-201ENSMUST00000221736 2209 ntBASIC13.06□□□□□ -0.32
Timp3P39876 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Timp3P39876 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC13.06□□□□□ -0.32
Timp3P39876 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Timp3P39876 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Timp3P39876 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Timp3P39876 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC13.06□□□□□ -0.32
Timp3P39876 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Timp3P39876 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Timp3P39876 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Timp3P39876 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC13.06□□□□□ -0.32
Timp3P39876 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Timp3P39876 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Timp3P39876 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC13.06□□□□□ -0.32
Timp3P39876 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Timp3P39876 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Timp3P39876 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Timp3P39876 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC13.05□□□□□ -0.32
Timp3P39876 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Timp3P39876 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Timp3P39876 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms