Protein–RNA interactions for Protein: P39689

Cdkn1a, Cyclin-dependent kinase inhibitor 1, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1aP39689 AC138767.1-201ENSMUST00000222661 415 ntBASIC13.15□□□□□ -0.3
Cdkn1aP39689 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdkn1aP39689 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdkn1aP39689 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdkn1aP39689 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Cdkn1aP39689 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdkn1aP39689 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdkn1aP39689 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdkn1aP39689 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdkn1aP39689 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Cdkn1aP39689 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Cdkn1aP39689 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cdkn1aP39689 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdkn1aP39689 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdkn1aP39689 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdkn1aP39689 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdkn1aP39689 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdkn1aP39689 Gm45774-201ENSMUST00000211992 2665 ntBASIC13.14□□□□□ -0.31
Cdkn1aP39689 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdkn1aP39689 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cdkn1aP39689 Gm15173-201ENSMUST00000122049 433 ntBASIC13.14□□□□□ -0.31
Cdkn1aP39689 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC13.14□□□□□ -0.31
Cdkn1aP39689 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC13.14□□□□□ -0.31
Cdkn1aP39689 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC13.14□□□□□ -0.31
Cdkn1aP39689 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC13.14□□□□□ -0.31
Cdkn1aP39689 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cdkn1aP39689 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdkn1aP39689 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cdkn1aP39689 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdkn1aP39689 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC13.14□□□□□ -0.31
Cdkn1aP39689 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Cdkn1aP39689 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdkn1aP39689 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC13.14□□□□□ -0.31
Cdkn1aP39689 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdkn1aP39689 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cdkn1aP39689 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdkn1aP39689 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdkn1aP39689 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdkn1aP39689 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cdkn1aP39689 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdkn1aP39689 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC13.13□□□□□ -0.31
Cdkn1aP39689 AC115863.1-201ENSMUST00000214815 1813 ntBASIC13.13□□□□□ -0.31
Cdkn1aP39689 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdkn1aP39689 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdkn1aP39689 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdkn1aP39689 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
Cdkn1aP39689 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cdkn1aP39689 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdkn1aP39689 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Cdkn1aP39689 Gm5837-201ENSMUST00000191844 1369 ntBASIC13.13□□□□□ -0.31
Cdkn1aP39689 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdkn1aP39689 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cdkn1aP39689 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC13.13□□□□□ -0.31
Cdkn1aP39689 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdkn1aP39689 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cdkn1aP39689 Gm6443-201ENSMUST00000203599 874 ntBASIC13.13□□□□□ -0.31
Cdkn1aP39689 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cdkn1aP39689 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdkn1aP39689 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdkn1aP39689 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdkn1aP39689 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdkn1aP39689 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdkn1aP39689 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdkn1aP39689 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Cdkn1aP39689 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC13.13□□□□□ -0.31
Cdkn1aP39689 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC13.13□□□□□ -0.31
Cdkn1aP39689 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdkn1aP39689 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
Cdkn1aP39689 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdkn1aP39689 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdkn1aP39689 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdkn1aP39689 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
Cdkn1aP39689 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdkn1aP39689 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC13.12□□□□□ -0.31
Cdkn1aP39689 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdkn1aP39689 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cdkn1aP39689 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cdkn1aP39689 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Cdkn1aP39689 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Cdkn1aP39689 Gm4609-201ENSMUST00000106443 1002 ntBASIC13.12□□□□□ -0.31
Cdkn1aP39689 Gm5138-201ENSMUST00000113842 1002 ntBASIC13.12□□□□□ -0.31
Cdkn1aP39689 Gm15191-201ENSMUST00000117933 1000 ntBASIC13.12□□□□□ -0.31
Cdkn1aP39689 Gm12182-201ENSMUST00000118655 1008 ntBASIC13.12□□□□□ -0.31
Cdkn1aP39689 Gm13882-201ENSMUST00000120886 1002 ntBASIC13.12□□□□□ -0.31
Cdkn1aP39689 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdkn1aP39689 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC13.12□□□□□ -0.31
Cdkn1aP39689 Gm10284-201ENSMUST00000145057 1005 ntBASIC13.12□□□□□ -0.31
Cdkn1aP39689 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cdkn1aP39689 Gm10481-201ENSMUST00000179228 1002 ntBASIC13.12□□□□□ -0.31
Cdkn1aP39689 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC13.12□□□□□ -0.31
Cdkn1aP39689 Gm2574-201ENSMUST00000181051 1002 ntBASIC13.12□□□□□ -0.31
Cdkn1aP39689 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cdkn1aP39689 Gm3200-201ENSMUST00000181493 1002 ntBASIC13.12□□□□□ -0.31
Cdkn1aP39689 Gm8825-201ENSMUST00000182565 998 ntBASIC13.12□□□□□ -0.31
Cdkn1aP39689 Gm4518-201ENSMUST00000182638 718 ntBASIC13.12□□□□□ -0.31
Cdkn1aP39689 Gm8330-201ENSMUST00000182754 1008 ntBASIC13.12□□□□□ -0.31
Cdkn1aP39689 Gm4575-201ENSMUST00000182991 1002 ntBASIC13.12□□□□□ -0.31
Cdkn1aP39689 Gm8709-201ENSMUST00000183230 1012 ntBASIC13.12□□□□□ -0.31
Cdkn1aP39689 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC13.12□□□□□ -0.31
Cdkn1aP39689 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms