Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Slc6a1P31648 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Slc6a1P31648 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Slc6a1P31648 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Slc6a1P31648 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Slc6a1P31648 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Slc6a1P31648 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Slc6a1P31648 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Slc6a1P31648 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Slc6a1P31648 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Slc6a1P31648 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Slc6a1P31648 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Slc6a1P31648 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Slc6a1P31648 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Slc6a1P31648 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.78□□□□□ -0.2
Slc6a1P31648 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Slc6a1P31648 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Slc6a1P31648 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Slc6a1P31648 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Slc6a1P31648 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC13.77□□□□□ -0.2
Slc6a1P31648 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Slc6a1P31648 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Slc6a1P31648 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Slc6a1P31648 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Slc6a1P31648 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Slc6a1P31648 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Slc6a1P31648 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC13.77□□□□□ -0.21
Slc6a1P31648 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Slc6a1P31648 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Slc6a1P31648 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Slc6a1P31648 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Slc6a1P31648 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Slc6a1P31648 Gm18025-201ENSMUST00000221733 862 ntBASIC13.77□□□□□ -0.21
Slc6a1P31648 Tfap2a-203ENSMUST00000223869 2037 ntBASIC13.77□□□□□ -0.21
Slc6a1P31648 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Slc6a1P31648 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Slc6a1P31648 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC13.77□□□□□ -0.21
Slc6a1P31648 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Slc6a1P31648 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Slc6a1P31648 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Slc6a1P31648 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Slc6a1P31648 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Slc6a1P31648 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Slc6a1P31648 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Slc6a1P31648 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Slc6a1P31648 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Slc6a1P31648 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Slc6a1P31648 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Slc6a1P31648 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Slc6a1P31648 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Slc6a1P31648 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Slc6a1P31648 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.76□□□□□ -0.21
Slc6a1P31648 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Slc6a1P31648 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Slc6a1P31648 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Slc6a1P31648 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Slc6a1P31648 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
Slc6a1P31648 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC13.76□□□□□ -0.21
Slc6a1P31648 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC13.76□□□□□ -0.21
Slc6a1P31648 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Slc6a1P31648 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Slc6a1P31648 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Slc6a1P31648 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Slc6a1P31648 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Slc6a1P31648 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Slc6a1P31648 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Slc6a1P31648 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Slc6a1P31648 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Slc6a1P31648 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Slc6a1P31648 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Slc6a1P31648 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Slc6a1P31648 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC13.76□□□□□ -0.21
Slc6a1P31648 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Slc6a1P31648 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Slc6a1P31648 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC13.75□□□□□ -0.21
Slc6a1P31648 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Slc6a1P31648 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Slc6a1P31648 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Slc6a1P31648 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Slc6a1P31648 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Slc6a1P31648 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC13.75□□□□□ -0.21
Slc6a1P31648 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Slc6a1P31648 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Slc6a1P31648 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Slc6a1P31648 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Slc6a1P31648 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
Slc6a1P31648 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Slc6a1P31648 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Slc6a1P31648 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Slc6a1P31648 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
Slc6a1P31648 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Slc6a1P31648 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Slc6a1P31648 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Slc6a1P31648 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Slc6a1P31648 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Slc6a1P31648 Gm37305-201ENSMUST00000195714 4279 ntBASIC13.75□□□□□ -0.21
Slc6a1P31648 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Slc6a1P31648 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Slc6a1P31648 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Slc6a1P31648 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms