Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC14.86□□□□□ -0.03
Nedd8P29595 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC14.86□□□□□ -0.03
Nedd8P29595 Gm27000-201ENSMUST00000182943 842 ntBASIC14.86□□□□□ -0.03
Nedd8P29595 Gm21168-201ENSMUST00000199646 1096 ntBASIC14.86□□□□□ -0.03
Nedd8P29595 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nedd8P29595 Gm6365-201ENSMUST00000054711 744 ntBASIC14.86□□□□□ -0.03
Nedd8P29595 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nedd8P29595 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nedd8P29595 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Nedd8P29595 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nedd8P29595 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nedd8P29595 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC14.85□□□□□ -0.03
Nedd8P29595 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nedd8P29595 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nedd8P29595 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Nedd8P29595 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nedd8P29595 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.85□□□□□ -0.03
Nedd8P29595 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Nedd8P29595 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Nedd8P29595 Gm10138-203ENSMUST00000206952 366 ntBASIC14.85□□□□□ -0.03
Nedd8P29595 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Nedd8P29595 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nedd8P29595 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nedd8P29595 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nedd8P29595 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nedd8P29595 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nedd8P29595 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nedd8P29595 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nedd8P29595 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nedd8P29595 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Nedd8P29595 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nedd8P29595 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nedd8P29595 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.84□□□□□ -0.03
Nedd8P29595 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nedd8P29595 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nedd8P29595 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nedd8P29595 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.84□□□□□ -0.03
Nedd8P29595 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nedd8P29595 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nedd8P29595 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nedd8P29595 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nedd8P29595 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nedd8P29595 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Nedd8P29595 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.84□□□□□ -0.03
Nedd8P29595 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC14.84□□□□□ -0.03
Nedd8P29595 Gm15375-201ENSMUST00000119510 849 ntBASIC14.84□□□□□ -0.03
Nedd8P29595 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC14.84□□□□□ -0.03
Nedd8P29595 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC14.84□□□□□ -0.03
Nedd8P29595 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nedd8P29595 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nedd8P29595 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nedd8P29595 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nedd8P29595 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nedd8P29595 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nedd8P29595 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nedd8P29595 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Nedd8P29595 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Nedd8P29595 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Nedd8P29595 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Nedd8P29595 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Nedd8P29595 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Nedd8P29595 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Nedd8P29595 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Nedd8P29595 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Nedd8P29595 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nedd8P29595 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nedd8P29595 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nedd8P29595 Gm15847-201ENSMUST00000121417 1065 ntBASIC14.83□□□□□ -0.04
Nedd8P29595 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC14.83□□□□□ -0.04
Nedd8P29595 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.83□□□□□ -0.04
Nedd8P29595 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nedd8P29595 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Nedd8P29595 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Nedd8P29595 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nedd8P29595 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nedd8P29595 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Nedd8P29595 Gm45560-201ENSMUST00000211492 1472 ntBASIC14.82□□□□□ -0.04
Nedd8P29595 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Nedd8P29595 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.82□□□□□ -0.04
Nedd8P29595 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nedd8P29595 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nedd8P29595 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nedd8P29595 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nedd8P29595 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nedd8P29595 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nedd8P29595 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Nedd8P29595 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nedd8P29595 Gm4974-201ENSMUST00000209974 875 ntBASIC14.82□□□□□ -0.04
Nedd8P29595 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nedd8P29595 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nedd8P29595 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nedd8P29595 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nedd8P29595 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nedd8P29595 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Nedd8P29595 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nedd8P29595 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nedd8P29595 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Nedd8P29595 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nedd8P29595 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nedd8P29595 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms