Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vcam1P29533 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vcam1P29533 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC18.31■□□□□ 0.52
Vcam1P29533 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vcam1P29533 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Vcam1P29533 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC18.31■□□□□ 0.52
Vcam1P29533 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vcam1P29533 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vcam1P29533 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vcam1P29533 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.31■□□□□ 0.52
Vcam1P29533 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vcam1P29533 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vcam1P29533 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
Vcam1P29533 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vcam1P29533 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Vcam1P29533 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Vcam1P29533 Best4-ps-201ENSMUST00000129783 1380 ntBASIC18.3■□□□□ 0.52
Vcam1P29533 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Vcam1P29533 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vcam1P29533 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Vcam1P29533 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Vcam1P29533 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC18.3■□□□□ 0.52
Vcam1P29533 Gm18489-201ENSMUST00000172565 551 ntBASIC18.3■□□□□ 0.52
Vcam1P29533 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vcam1P29533 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vcam1P29533 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Vcam1P29533 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vcam1P29533 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vcam1P29533 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vcam1P29533 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vcam1P29533 Grk6-207ENSMUST00000225925 2769 ntBASIC18.3■□□□□ 0.52
Vcam1P29533 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vcam1P29533 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vcam1P29533 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Vcam1P29533 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vcam1P29533 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vcam1P29533 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vcam1P29533 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vcam1P29533 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Vcam1P29533 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vcam1P29533 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vcam1P29533 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC18.29■□□□□ 0.52
Vcam1P29533 Gm13597-201ENSMUST00000121239 375 ntBASIC18.29■□□□□ 0.52
Vcam1P29533 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vcam1P29533 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC18.29■□□□□ 0.52
Vcam1P29533 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Vcam1P29533 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Vcam1P29533 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Vcam1P29533 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vcam1P29533 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC18.29■□□□□ 0.52
Vcam1P29533 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vcam1P29533 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Vcam1P29533 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Vcam1P29533 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vcam1P29533 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Vcam1P29533 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vcam1P29533 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Vcam1P29533 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vcam1P29533 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vcam1P29533 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Vcam1P29533 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.28■□□□□ 0.52
Vcam1P29533 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Vcam1P29533 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC18.28■□□□□ 0.52
Vcam1P29533 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC18.28■□□□□ 0.52
Vcam1P29533 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC18.28■□□□□ 0.52
Vcam1P29533 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vcam1P29533 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Vcam1P29533 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Vcam1P29533 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vcam1P29533 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
Vcam1P29533 Gm38318-201ENSMUST00000195769 1706 ntBASIC18.28■□□□□ 0.52
Vcam1P29533 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vcam1P29533 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vcam1P29533 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Vcam1P29533 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vcam1P29533 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vcam1P29533 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vcam1P29533 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Vcam1P29533 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vcam1P29533 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vcam1P29533 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.27■□□□□ 0.52
Vcam1P29533 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Vcam1P29533 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC18.27■□□□□ 0.52
Vcam1P29533 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vcam1P29533 AC159295.1-201ENSMUST00000225326 940 ntBASIC18.27■□□□□ 0.52
Vcam1P29533 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vcam1P29533 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.27■□□□□ 0.52
Vcam1P29533 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Vcam1P29533 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Vcam1P29533 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Vcam1P29533 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Vcam1P29533 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Vcam1P29533 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Vcam1P29533 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vcam1P29533 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vcam1P29533 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vcam1P29533 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vcam1P29533 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Vcam1P29533 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC18.26■□□□□ 0.51
Vcam1P29533 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms