Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccl6P27784 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC12.49□□□□□ -0.41
Ccl6P27784 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccl6P27784 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccl6P27784 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccl6P27784 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccl6P27784 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccl6P27784 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccl6P27784 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccl6P27784 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccl6P27784 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccl6P27784 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccl6P27784 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccl6P27784 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ccl6P27784 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccl6P27784 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccl6P27784 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccl6P27784 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ccl6P27784 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Ccl6P27784 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccl6P27784 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccl6P27784 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccl6P27784 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccl6P27784 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccl6P27784 Gm8258-201ENSMUST00000055593 1449 ntBASIC12.48□□□□□ -0.41
Ccl6P27784 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccl6P27784 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccl6P27784 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Ccl6P27784 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccl6P27784 Gm23634-201ENSMUST00000175071 91 ntBASIC12.48□□□□□ -0.41
Ccl6P27784 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC12.48□□□□□ -0.41
Ccl6P27784 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccl6P27784 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccl6P27784 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccl6P27784 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC12.48□□□□□ -0.41
Ccl6P27784 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC12.48□□□□□ -0.41
Ccl6P27784 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccl6P27784 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC12.48□□□□□ -0.41
Ccl6P27784 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccl6P27784 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccl6P27784 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccl6P27784 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccl6P27784 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Ccl6P27784 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Ccl6P27784 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccl6P27784 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccl6P27784 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccl6P27784 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccl6P27784 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccl6P27784 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccl6P27784 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccl6P27784 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccl6P27784 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccl6P27784 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccl6P27784 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccl6P27784 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccl6P27784 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccl6P27784 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccl6P27784 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccl6P27784 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccl6P27784 Gm6345-202ENSMUST00000180900 204 ntBASIC12.47□□□□□ -0.41
Ccl6P27784 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC12.47□□□□□ -0.41
Ccl6P27784 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccl6P27784 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Ccl6P27784 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccl6P27784 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccl6P27784 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccl6P27784 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccl6P27784 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Ccl6P27784 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccl6P27784 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Ccl6P27784 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccl6P27784 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccl6P27784 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccl6P27784 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccl6P27784 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccl6P27784 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccl6P27784 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccl6P27784 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccl6P27784 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC12.47□□□□□ -0.41
Ccl6P27784 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccl6P27784 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC12.47□□□□□ -0.41
Ccl6P27784 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Ccl6P27784 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccl6P27784 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccl6P27784 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccl6P27784 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccl6P27784 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC12.46□□□□□ -0.41
Ccl6P27784 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccl6P27784 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccl6P27784 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccl6P27784 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccl6P27784 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccl6P27784 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccl6P27784 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccl6P27784 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccl6P27784 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ccl6P27784 Gm14464-201ENSMUST00000119658 1254 ntBASIC12.46□□□□□ -0.41
Ccl6P27784 Gm6659-201ENSMUST00000174752 547 ntBASIC12.46□□□□□ -0.41
Ccl6P27784 Gm6728-201ENSMUST00000178117 1065 ntBASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms