Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tnfrsf1bP25119 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Tnfrsf1bP25119 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Tnfrsf1bP25119 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Tnfrsf1bP25119 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Tnfrsf1bP25119 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tnfrsf1bP25119 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tnfrsf1bP25119 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tnfrsf1bP25119 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
Tnfrsf1bP25119 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tnfrsf1bP25119 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tnfrsf1bP25119 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tnfrsf1bP25119 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tnfrsf1bP25119 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Tnfrsf1bP25119 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tnfrsf1bP25119 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tnfrsf1bP25119 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC14.78□□□□□ -0.04
Tnfrsf1bP25119 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Tnfrsf1bP25119 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
Tnfrsf1bP25119 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tnfrsf1bP25119 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Tnfrsf1bP25119 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Tnfrsf1bP25119 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.78□□□□□ -0.04
Tnfrsf1bP25119 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC14.78□□□□□ -0.04
Tnfrsf1bP25119 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC14.78□□□□□ -0.04
Tnfrsf1bP25119 Mir6404-201ENSMUST00000183699 94 ntBASIC14.78□□□□□ -0.04
Tnfrsf1bP25119 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC14.78□□□□□ -0.04
Tnfrsf1bP25119 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC14.78□□□□□ -0.04
Tnfrsf1bP25119 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.78□□□□□ -0.04
Tnfrsf1bP25119 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.78□□□□□ -0.04
Tnfrsf1bP25119 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tnfrsf1bP25119 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tnfrsf1bP25119 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tnfrsf1bP25119 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tnfrsf1bP25119 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Tnfrsf1bP25119 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tnfrsf1bP25119 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Tnfrsf1bP25119 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tnfrsf1bP25119 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tnfrsf1bP25119 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Tnfrsf1bP25119 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Tnfrsf1bP25119 Gm43548-201ENSMUST00000197139 2353 ntBASIC14.77□□□□□ -0.04
Tnfrsf1bP25119 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Tnfrsf1bP25119 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Tnfrsf1bP25119 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Tnfrsf1bP25119 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Tnfrsf1bP25119 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Tnfrsf1bP25119 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Tnfrsf1bP25119 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Tnfrsf1bP25119 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC14.77□□□□□ -0.05
Tnfrsf1bP25119 Gm12644-201ENSMUST00000119935 606 ntBASIC14.77□□□□□ -0.05
Tnfrsf1bP25119 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Tnfrsf1bP25119 Gm44487-201ENSMUST00000205145 325 ntBASIC14.77□□□□□ -0.05
Tnfrsf1bP25119 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Tnfrsf1bP25119 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Tnfrsf1bP25119 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Tnfrsf1bP25119 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Tnfrsf1bP25119 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.05
Tnfrsf1bP25119 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tnfrsf1bP25119 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Tnfrsf1bP25119 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.76□□□□□ -0.05
Tnfrsf1bP25119 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Tnfrsf1bP25119 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tnfrsf1bP25119 Gm25745-201ENSMUST00000174945 133 ntBASIC14.76□□□□□ -0.05
Tnfrsf1bP25119 Gm17971-201ENSMUST00000190239 806 ntBASIC14.76□□□□□ -0.05
Tnfrsf1bP25119 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tnfrsf1bP25119 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Tnfrsf1bP25119 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tnfrsf1bP25119 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tnfrsf1bP25119 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tnfrsf1bP25119 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tnfrsf1bP25119 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Tnfrsf1bP25119 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC14.75□□□□□ -0.05
Tnfrsf1bP25119 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tnfrsf1bP25119 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tnfrsf1bP25119 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tnfrsf1bP25119 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Tnfrsf1bP25119 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.75□□□□□ -0.05
Tnfrsf1bP25119 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tnfrsf1bP25119 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.75□□□□□ -0.05
Tnfrsf1bP25119 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tnfrsf1bP25119 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tnfrsf1bP25119 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Tnfrsf1bP25119 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tnfrsf1bP25119 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tnfrsf1bP25119 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Tnfrsf1bP25119 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Tnfrsf1bP25119 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.75□□□□□ -0.05
Tnfrsf1bP25119 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tnfrsf1bP25119 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Tnfrsf1bP25119 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tnfrsf1bP25119 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Tnfrsf1bP25119 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tnfrsf1bP25119 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tnfrsf1bP25119 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.74□□□□□ -0.05
Tnfrsf1bP25119 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tnfrsf1bP25119 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Tnfrsf1bP25119 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tnfrsf1bP25119 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tnfrsf1bP25119 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms