Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Clk1P22518 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Clk1P22518 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Clk1P22518 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Clk1P22518 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
Clk1P22518 Gm36858-201ENSMUST00000194501 2391 ntBASIC14.87□□□□□ -0.03
Clk1P22518 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Clk1P22518 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC14.87□□□□□ -0.03
Clk1P22518 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC14.87□□□□□ -0.03
Clk1P22518 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC14.87□□□□□ -0.03
Clk1P22518 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Clk1P22518 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Clk1P22518 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Clk1P22518 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC14.87□□□□□ -0.03
Clk1P22518 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Clk1P22518 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Clk1P22518 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Clk1P22518 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Clk1P22518 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Clk1P22518 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Clk1P22518 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Clk1P22518 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Clk1P22518 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Clk1P22518 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC14.87□□□□□ -0.03
Clk1P22518 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Clk1P22518 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Clk1P22518 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Clk1P22518 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Clk1P22518 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Clk1P22518 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Clk1P22518 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Clk1P22518 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Clk1P22518 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
Clk1P22518 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC14.86□□□□□ -0.03
Clk1P22518 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Clk1P22518 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Clk1P22518 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Clk1P22518 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Clk1P22518 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Clk1P22518 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Clk1P22518 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Clk1P22518 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Clk1P22518 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Clk1P22518 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Clk1P22518 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Clk1P22518 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Clk1P22518 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Clk1P22518 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Clk1P22518 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clk1P22518 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clk1P22518 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clk1P22518 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Clk1P22518 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Clk1P22518 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clk1P22518 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Clk1P22518 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Clk1P22518 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clk1P22518 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clk1P22518 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Clk1P22518 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clk1P22518 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clk1P22518 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC14.85□□□□□ -0.03
Clk1P22518 Gm36967-201ENSMUST00000193814 266 ntBASIC14.85□□□□□ -0.03
Clk1P22518 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Clk1P22518 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clk1P22518 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clk1P22518 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clk1P22518 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC14.85□□□□□ -0.03
Clk1P22518 Mbnl2-204ENSMUST00000227012 2390 ntBASIC14.85□□□□□ -0.03
Clk1P22518 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clk1P22518 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clk1P22518 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clk1P22518 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clk1P22518 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clk1P22518 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Clk1P22518 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clk1P22518 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clk1P22518 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clk1P22518 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clk1P22518 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clk1P22518 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Clk1P22518 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clk1P22518 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clk1P22518 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.84□□□□□ -0.03
Clk1P22518 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clk1P22518 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Clk1P22518 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Clk1P22518 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clk1P22518 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clk1P22518 AA414768-201ENSMUST00000121924 1257 ntBASIC14.84□□□□□ -0.03
Clk1P22518 Gm23634-201ENSMUST00000175071 91 ntBASIC14.84□□□□□ -0.03
Clk1P22518 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clk1P22518 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clk1P22518 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clk1P22518 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clk1P22518 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Clk1P22518 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC14.84□□□□□ -0.03
Clk1P22518 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clk1P22518 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clk1P22518 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms