Protein–RNA interactions for Protein: P13438

Tpbpa, Trophoblast-specific protein alpha, mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TpbpaP13438 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TpbpaP13438 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC14.52□□□□□ -0.09
TpbpaP13438 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.09
TpbpaP13438 Gm3375-201ENSMUST00000203929 796 ntBASIC14.52□□□□□ -0.09
TpbpaP13438 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC14.52□□□□□ -0.09
TpbpaP13438 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TpbpaP13438 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TpbpaP13438 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
TpbpaP13438 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TpbpaP13438 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TpbpaP13438 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TpbpaP13438 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.52□□□□□ -0.09
TpbpaP13438 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TpbpaP13438 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TpbpaP13438 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TpbpaP13438 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
TpbpaP13438 CT010478.1-201ENSMUST00000220747 2787 ntBASIC14.51□□□□□ -0.09
TpbpaP13438 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TpbpaP13438 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
TpbpaP13438 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
TpbpaP13438 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
TpbpaP13438 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TpbpaP13438 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TpbpaP13438 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TpbpaP13438 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TpbpaP13438 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TpbpaP13438 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TpbpaP13438 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TpbpaP13438 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TpbpaP13438 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TpbpaP13438 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TpbpaP13438 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC14.51□□□□□ -0.09
TpbpaP13438 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TpbpaP13438 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TpbpaP13438 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TpbpaP13438 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TpbpaP13438 Gm10812-201ENSMUST00000099864 546 ntBASIC14.51□□□□□ -0.09
TpbpaP13438 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TpbpaP13438 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TpbpaP13438 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TpbpaP13438 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TpbpaP13438 Prob1-201ENSMUST00000097619 3021 ntBASIC14.51□□□□□ -0.09
TpbpaP13438 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TpbpaP13438 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.51□□□□□ -0.09
TpbpaP13438 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TpbpaP13438 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TpbpaP13438 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TpbpaP13438 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TpbpaP13438 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TpbpaP13438 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TpbpaP13438 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TpbpaP13438 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TpbpaP13438 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TpbpaP13438 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TpbpaP13438 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TpbpaP13438 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.5□□□□□ -0.09
TpbpaP13438 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TpbpaP13438 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TpbpaP13438 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TpbpaP13438 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TpbpaP13438 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TpbpaP13438 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TpbpaP13438 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC14.5□□□□□ -0.09
TpbpaP13438 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TpbpaP13438 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC14.5□□□□□ -0.09
TpbpaP13438 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TpbpaP13438 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14.5□□□□□ -0.09
TpbpaP13438 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.5□□□□□ -0.09
TpbpaP13438 Phf7-203ENSMUST00000226565 1971 ntBASIC14.5□□□□□ -0.09
TpbpaP13438 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TpbpaP13438 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TpbpaP13438 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
TpbpaP13438 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TpbpaP13438 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TpbpaP13438 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TpbpaP13438 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TpbpaP13438 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TpbpaP13438 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TpbpaP13438 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
TpbpaP13438 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TpbpaP13438 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TpbpaP13438 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TpbpaP13438 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
TpbpaP13438 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
TpbpaP13438 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TpbpaP13438 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TpbpaP13438 Gm43353-201ENSMUST00000199224 1295 ntBASIC14.49□□□□□ -0.09
TpbpaP13438 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.49□□□□□ -0.09
TpbpaP13438 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TpbpaP13438 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TpbpaP13438 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TpbpaP13438 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TpbpaP13438 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TpbpaP13438 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
TpbpaP13438 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TpbpaP13438 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TpbpaP13438 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TpbpaP13438 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TpbpaP13438 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TpbpaP13438 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms