Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccl3P10855 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccl3P10855 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccl3P10855 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Ccl3P10855 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccl3P10855 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccl3P10855 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccl3P10855 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccl3P10855 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccl3P10855 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccl3P10855 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccl3P10855 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccl3P10855 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccl3P10855 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC14.07□□□□□ -0.16
Ccl3P10855 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Ccl3P10855 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccl3P10855 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccl3P10855 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.07□□□□□ -0.16
Ccl3P10855 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccl3P10855 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccl3P10855 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Ccl3P10855 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.07□□□□□ -0.16
Ccl3P10855 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC14.07□□□□□ -0.16
Ccl3P10855 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccl3P10855 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC14.07□□□□□ -0.16
Ccl3P10855 Gm9682-201ENSMUST00000197505 556 ntBASIC14.07□□□□□ -0.16
Ccl3P10855 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.07□□□□□ -0.16
Ccl3P10855 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccl3P10855 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccl3P10855 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Ccl3P10855 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccl3P10855 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccl3P10855 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccl3P10855 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Ccl3P10855 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccl3P10855 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccl3P10855 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccl3P10855 Gm44832-201ENSMUST00000208849 2303 ntBASIC14.07□□□□□ -0.16
Ccl3P10855 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccl3P10855 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccl3P10855 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccl3P10855 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Ccl3P10855 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.06□□□□□ -0.16
Ccl3P10855 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccl3P10855 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccl3P10855 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccl3P10855 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccl3P10855 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccl3P10855 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccl3P10855 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccl3P10855 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccl3P10855 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC14.06□□□□□ -0.16
Ccl3P10855 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Ccl3P10855 Gm14701-201ENSMUST00000117156 348 ntBASIC14.06□□□□□ -0.16
Ccl3P10855 Gm11025-201ENSMUST00000140773 466 ntBASIC14.06□□□□□ -0.16
Ccl3P10855 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC14.06□□□□□ -0.16
Ccl3P10855 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccl3P10855 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.06□□□□□ -0.16
Ccl3P10855 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.06□□□□□ -0.16
Ccl3P10855 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccl3P10855 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccl3P10855 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccl3P10855 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccl3P10855 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.06□□□□□ -0.16
Ccl3P10855 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccl3P10855 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccl3P10855 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccl3P10855 Gm43702-201ENSMUST00000198772 2546 ntBASIC14.05□□□□□ -0.16
Ccl3P10855 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccl3P10855 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccl3P10855 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccl3P10855 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC14.05□□□□□ -0.16
Ccl3P10855 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccl3P10855 Gm43338-201ENSMUST00000198617 2223 ntBASIC14.05□□□□□ -0.16
Ccl3P10855 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccl3P10855 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccl3P10855 Gm15920-201ENSMUST00000118998 402 ntBASIC14.05□□□□□ -0.16
Ccl3P10855 Gm18489-201ENSMUST00000172565 551 ntBASIC14.05□□□□□ -0.16
Ccl3P10855 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccl3P10855 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC14.05□□□□□ -0.16
Ccl3P10855 Gm7063-201ENSMUST00000186840 981 ntBASIC14.05□□□□□ -0.16
Ccl3P10855 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccl3P10855 Gm44492-201ENSMUST00000197012 141 ntBASIC14.05□□□□□ -0.16
Ccl3P10855 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccl3P10855 Gm19164-201ENSMUST00000210667 640 ntBASIC14.05□□□□□ -0.16
Ccl3P10855 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.05□□□□□ -0.16
Ccl3P10855 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccl3P10855 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccl3P10855 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Ccl3P10855 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccl3P10855 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccl3P10855 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC14.05□□□□□ -0.16
Ccl3P10855 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccl3P10855 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC14.05□□□□□ -0.16
Ccl3P10855 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Ccl3P10855 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccl3P10855 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC14.05□□□□□ -0.16
Ccl3P10855 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Ccl3P10855 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccl3P10855 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms