Protein–RNA interactions for Protein: P04943

Ig kappa chain V-VI region NQ6-8.3.1, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04943 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
P04943 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
P04943 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
P04943 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC12.82□□□□□ -0.36
P04943 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
P04943 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
P04943 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
P04943 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC12.82□□□□□ -0.36
P04943 Gm7977-201ENSMUST00000193787 748 ntBASIC12.82□□□□□ -0.36
P04943 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC12.82□□□□□ -0.36
P04943 AC133083.1-201ENSMUST00000221736 2209 ntBASIC12.82□□□□□ -0.36
P04943 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
P04943 AC163637.1-201ENSMUST00000215491 1894 ntBASIC12.82□□□□□ -0.36
P04943 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
P04943 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC12.82□□□□□ -0.36
P04943 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
P04943 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
P04943 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
P04943 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
P04943 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
P04943 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC12.81□□□□□ -0.36
P04943 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
P04943 Ccdc166-201ENSMUST00000182172 2584 ntBASIC12.81□□□□□ -0.36
P04943 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P04943 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
P04943 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
P04943 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC12.81□□□□□ -0.36
P04943 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
P04943 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
P04943 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P04943 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC12.81□□□□□ -0.36
P04943 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P04943 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
P04943 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC12.81□□□□□ -0.36
P04943 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
P04943 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC12.81□□□□□ -0.36
P04943 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
P04943 AC153889.1-201ENSMUST00000219257 330 ntBASIC12.81□□□□□ -0.36
P04943 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC12.81□□□□□ -0.36
P04943 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P04943 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
P04943 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
P04943 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P04943 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC12.81□□□□□ -0.36
P04943 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
P04943 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P04943 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
P04943 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
P04943 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC12.81□□□□□ -0.36
P04943 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
P04943 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P04943 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
P04943 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
P04943 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
P04943 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
P04943 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P04943 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
P04943 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
P04943 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
P04943 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P04943 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
P04943 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
P04943 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P04943 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P04943 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
P04943 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
P04943 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P04943 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
P04943 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC12.8□□□□□ -0.36
P04943 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
P04943 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC12.8□□□□□ -0.36
P04943 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
P04943 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC12.8□□□□□ -0.36
P04943 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC12.8□□□□□ -0.36
P04943 AC127302.2-201ENSMUST00000215212 268 ntBASIC12.8□□□□□ -0.36
P04943 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P04943 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
P04943 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P04943 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P04943 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P04943 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P04943 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P04943 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
P04943 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P04943 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P04943 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
P04943 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
P04943 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
P04943 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC12.8□□□□□ -0.36
P04943 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
P04943 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P04943 Gm8784-201ENSMUST00000222096 1435 ntBASIC12.79□□□□□ -0.36
P04943 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P04943 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
P04943 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
P04943 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC12.79□□□□□ -0.36
P04943 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P04943 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P04943 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
P04943 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms