Protein–RNA interactions for Protein: P01734

T-cell receptor beta chain V region 3H.25, mousemouse

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01734 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC17.35■□□□□ 0.37
P01734 Gm6296-201ENSMUST00000222599 943 ntBASIC17.35■□□□□ 0.37
P01734 AC133598.3-202ENSMUST00000224219 531 ntBASIC17.35■□□□□ 0.37
P01734 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC17.35■□□□□ 0.37
P01734 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
P01734 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
P01734 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
P01734 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
P01734 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
P01734 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC17.35■□□□□ 0.37
P01734 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
P01734 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
P01734 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
P01734 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
P01734 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
P01734 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
P01734 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
P01734 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
P01734 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
P01734 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
P01734 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
P01734 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
P01734 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
P01734 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC17.34■□□□□ 0.37
P01734 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
P01734 Gm12497-201ENSMUST00000138778 237 ntBASIC17.34■□□□□ 0.37
P01734 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC17.34■□□□□ 0.37
P01734 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
P01734 AC164629.2-201ENSMUST00000217916 270 ntBASIC17.34■□□□□ 0.37
P01734 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.34■□□□□ 0.37
P01734 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
P01734 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
P01734 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.34■□□□□ 0.37
P01734 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
P01734 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
P01734 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
P01734 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC17.34■□□□□ 0.37
P01734 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
P01734 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
P01734 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
P01734 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
P01734 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
P01734 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
P01734 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
P01734 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
P01734 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
P01734 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC17.33■□□□□ 0.36
P01734 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
P01734 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
P01734 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
P01734 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
P01734 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
P01734 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC17.33■□□□□ 0.36
P01734 Gm6376-201ENSMUST00000209407 580 ntBASIC17.33■□□□□ 0.36
P01734 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC17.33■□□□□ 0.36
P01734 Rbfox2-207ENSMUST00000227533 1041 ntBASIC17.33■□□□□ 0.36
P01734 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
P01734 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
P01734 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
P01734 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
P01734 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
P01734 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
P01734 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
P01734 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
P01734 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
P01734 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
P01734 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
P01734 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
P01734 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
P01734 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
P01734 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
P01734 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
P01734 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
P01734 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
P01734 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
P01734 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC17.32■□□□□ 0.36
P01734 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
P01734 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC17.32■□□□□ 0.36
P01734 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
P01734 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
P01734 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
P01734 Rps4l-201ENSMUST00000071745 943 ntBASIC17.32■□□□□ 0.36
P01734 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
P01734 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
P01734 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
P01734 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
P01734 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
P01734 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
P01734 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
P01734 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
P01734 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
P01734 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
P01734 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
P01734 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
P01734 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
P01734 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
P01734 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
P01734 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
P01734 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
P01734 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 76.4 ms