Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Hcn3O88705 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hcn3O88705 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hcn3O88705 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hcn3O88705 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Hcn3O88705 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Hcn3O88705 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Hcn3O88705 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Hcn3O88705 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hcn3O88705 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Hcn3O88705 Gm21814-202ENSMUST00000203277 873 ntBASIC15.33■□□□□ 0.04
Hcn3O88705 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hcn3O88705 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Hcn3O88705 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hcn3O88705 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hcn3O88705 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hcn3O88705 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hcn3O88705 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Hcn3O88705 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.33■□□□□ 0.04
Hcn3O88705 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hcn3O88705 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Hcn3O88705 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Hcn3O88705 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hcn3O88705 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Hcn3O88705 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hcn3O88705 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.33■□□□□ 0.04
Hcn3O88705 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hcn3O88705 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hcn3O88705 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hcn3O88705 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Hcn3O88705 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hcn3O88705 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hcn3O88705 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hcn3O88705 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
Hcn3O88705 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hcn3O88705 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hcn3O88705 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Hcn3O88705 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Hcn3O88705 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hcn3O88705 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hcn3O88705 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Hcn3O88705 Gm38027-201ENSMUST00000192315 235 ntBASIC15.32■□□□□ 0.04
Hcn3O88705 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Hcn3O88705 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hcn3O88705 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Hcn3O88705 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hcn3O88705 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hcn3O88705 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hcn3O88705 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Hcn3O88705 Gm45133-201ENSMUST00000207548 2773 ntBASIC15.32■□□□□ 0.04
Hcn3O88705 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Hcn3O88705 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hcn3O88705 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hcn3O88705 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hcn3O88705 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Hcn3O88705 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Hcn3O88705 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hcn3O88705 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hcn3O88705 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hcn3O88705 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hcn3O88705 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Hcn3O88705 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Hcn3O88705 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hcn3O88705 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hcn3O88705 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hcn3O88705 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hcn3O88705 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC15.31■□□□□ 0.04
Hcn3O88705 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hcn3O88705 Gm37055-201ENSMUST00000191866 133 ntBASIC15.31■□□□□ 0.04
Hcn3O88705 Gm3375-201ENSMUST00000203929 796 ntBASIC15.31■□□□□ 0.04
Hcn3O88705 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hcn3O88705 Il3ra-202ENSMUST00000223589 738 ntBASIC15.31■□□□□ 0.04
Hcn3O88705 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hcn3O88705 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hcn3O88705 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hcn3O88705 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hcn3O88705 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hcn3O88705 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Hcn3O88705 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hcn3O88705 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Hcn3O88705 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hcn3O88705 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hcn3O88705 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hcn3O88705 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hcn3O88705 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hcn3O88705 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Hcn3O88705 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hcn3O88705 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Hcn3O88705 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Hcn3O88705 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC15.3■□□□□ 0.04
Hcn3O88705 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hcn3O88705 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC15.3■□□□□ 0.04
Hcn3O88705 Gm9484-201ENSMUST00000195892 1159 ntBASIC15.3■□□□□ 0.04
Hcn3O88705 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hcn3O88705 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC15.3■□□□□ 0.04
Hcn3O88705 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC15.3■□□□□ 0.04
Hcn3O88705 Phf7-203ENSMUST00000226565 1971 ntBASIC15.3■□□□□ 0.04
Hcn3O88705 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hcn3O88705 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hcn3O88705 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms