Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Tnfrsf17O88472 Gm4518-201ENSMUST00000182638 718 ntBASIC14.81□□□□□ -0.04
Tnfrsf17O88472 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.81□□□□□ -0.04
Tnfrsf17O88472 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.81□□□□□ -0.04
Tnfrsf17O88472 Gm5177-201ENSMUST00000183092 997 ntBASIC14.81□□□□□ -0.04
Tnfrsf17O88472 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.81□□□□□ -0.04
Tnfrsf17O88472 Gm27430-201ENSMUST00000184585 107 ntBASIC14.81□□□□□ -0.04
Tnfrsf17O88472 Gm44333-201ENSMUST00000197168 107 ntBASIC14.81□□□□□ -0.04
Tnfrsf17O88472 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tnfrsf17O88472 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tnfrsf17O88472 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Tnfrsf17O88472 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.81□□□□□ -0.04
Tnfrsf17O88472 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.81□□□□□ -0.04
Tnfrsf17O88472 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tnfrsf17O88472 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tnfrsf17O88472 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tnfrsf17O88472 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Tnfrsf17O88472 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.81□□□□□ -0.04
Tnfrsf17O88472 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tnfrsf17O88472 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Tnfrsf17O88472 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tnfrsf17O88472 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Tnfrsf17O88472 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tnfrsf17O88472 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tnfrsf17O88472 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Tnfrsf17O88472 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tnfrsf17O88472 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tnfrsf17O88472 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Tnfrsf17O88472 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tnfrsf17O88472 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tnfrsf17O88472 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Tnfrsf17O88472 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC14.8□□□□□ -0.04
Tnfrsf17O88472 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tnfrsf17O88472 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tnfrsf17O88472 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tnfrsf17O88472 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Tnfrsf17O88472 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Tnfrsf17O88472 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tnfrsf17O88472 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC14.8□□□□□ -0.04
Tnfrsf17O88472 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Tnfrsf17O88472 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.8□□□□□ -0.04
Tnfrsf17O88472 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC14.8□□□□□ -0.04
Tnfrsf17O88472 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.8□□□□□ -0.04
Tnfrsf17O88472 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.8□□□□□ -0.04
Tnfrsf17O88472 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Tnfrsf17O88472 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Tnfrsf17O88472 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC14.8□□□□□ -0.04
Tnfrsf17O88472 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC14.8□□□□□ -0.04
Tnfrsf17O88472 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tnfrsf17O88472 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tnfrsf17O88472 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tnfrsf17O88472 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Tnfrsf17O88472 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tnfrsf17O88472 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Tnfrsf17O88472 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tnfrsf17O88472 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tnfrsf17O88472 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tnfrsf17O88472 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tnfrsf17O88472 Tfap2a-209ENSMUST00000225180 1828 ntBASIC14.8□□□□□ -0.04
Tnfrsf17O88472 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC14.8□□□□□ -0.04
Tnfrsf17O88472 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Tnfrsf17O88472 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Tnfrsf17O88472 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tnfrsf17O88472 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tnfrsf17O88472 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Tnfrsf17O88472 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tnfrsf17O88472 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tnfrsf17O88472 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tnfrsf17O88472 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Tnfrsf17O88472 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tnfrsf17O88472 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Tnfrsf17O88472 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Tnfrsf17O88472 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Tnfrsf17O88472 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tnfrsf17O88472 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.79□□□□□ -0.04
Tnfrsf17O88472 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tnfrsf17O88472 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Tnfrsf17O88472 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Tnfrsf17O88472 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tnfrsf17O88472 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tnfrsf17O88472 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Tnfrsf17O88472 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tnfrsf17O88472 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tnfrsf17O88472 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Tnfrsf17O88472 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.79□□□□□ -0.04
Tnfrsf17O88472 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.79□□□□□ -0.04
Tnfrsf17O88472 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC14.79□□□□□ -0.04
Tnfrsf17O88472 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.79□□□□□ -0.04
Tnfrsf17O88472 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.79□□□□□ -0.04
Tnfrsf17O88472 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tnfrsf17O88472 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tnfrsf17O88472 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Tnfrsf17O88472 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tnfrsf17O88472 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tnfrsf17O88472 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tnfrsf17O88472 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Tnfrsf17O88472 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tnfrsf17O88472 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tnfrsf17O88472 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tnfrsf17O88472 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms