Protein–RNA interactions for Protein: O88351

Ikbkb, Inhibitor of nuclear factor kappa-B kinase subunit beta, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IkbkbO88351 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
IkbkbO88351 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
IkbkbO88351 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC17.65■□□□□ 0.42
IkbkbO88351 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
IkbkbO88351 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
IkbkbO88351 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
IkbkbO88351 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
IkbkbO88351 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
IkbkbO88351 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
IkbkbO88351 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
IkbkbO88351 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
IkbkbO88351 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
IkbkbO88351 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
IkbkbO88351 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
IkbkbO88351 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
IkbkbO88351 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
IkbkbO88351 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
IkbkbO88351 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
IkbkbO88351 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
IkbkbO88351 Gm7153-201ENSMUST00000117092 455 ntBASIC17.64■□□□□ 0.41
IkbkbO88351 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
IkbkbO88351 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
IkbkbO88351 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC17.64■□□□□ 0.41
IkbkbO88351 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
IkbkbO88351 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
IkbkbO88351 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
IkbkbO88351 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
IkbkbO88351 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
IkbkbO88351 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
IkbkbO88351 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
IkbkbO88351 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
IkbkbO88351 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
IkbkbO88351 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
IkbkbO88351 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
IkbkbO88351 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
IkbkbO88351 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
IkbkbO88351 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
IkbkbO88351 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC17.63■□□□□ 0.41
IkbkbO88351 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
IkbkbO88351 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
IkbkbO88351 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
IkbkbO88351 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
IkbkbO88351 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.63■□□□□ 0.41
IkbkbO88351 Gm12895-201ENSMUST00000122214 226 ntBASIC17.63■□□□□ 0.41
IkbkbO88351 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
IkbkbO88351 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.63■□□□□ 0.41
IkbkbO88351 Gm44430-201ENSMUST00000203376 995 ntBASIC17.63■□□□□ 0.41
IkbkbO88351 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
IkbkbO88351 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
IkbkbO88351 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
IkbkbO88351 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.63■□□□□ 0.41
IkbkbO88351 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
IkbkbO88351 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.63■□□□□ 0.41
IkbkbO88351 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
IkbkbO88351 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
IkbkbO88351 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
IkbkbO88351 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
IkbkbO88351 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
IkbkbO88351 Ccdc166-201ENSMUST00000182172 2584 ntBASIC17.62■□□□□ 0.41
IkbkbO88351 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
IkbkbO88351 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC17.62■□□□□ 0.41
IkbkbO88351 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
IkbkbO88351 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
IkbkbO88351 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
IkbkbO88351 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
IkbkbO88351 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
IkbkbO88351 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
IkbkbO88351 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
IkbkbO88351 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
IkbkbO88351 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
IkbkbO88351 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
IkbkbO88351 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
IkbkbO88351 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
IkbkbO88351 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
IkbkbO88351 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
IkbkbO88351 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
IkbkbO88351 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
IkbkbO88351 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
IkbkbO88351 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
IkbkbO88351 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
IkbkbO88351 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
IkbkbO88351 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
IkbkbO88351 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
IkbkbO88351 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
IkbkbO88351 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
IkbkbO88351 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
IkbkbO88351 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
IkbkbO88351 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
IkbkbO88351 Gm24589-201ENSMUST00000116692 94 ntBASIC17.61■□□□□ 0.41
IkbkbO88351 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC17.61■□□□□ 0.41
IkbkbO88351 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
IkbkbO88351 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.61■□□□□ 0.41
IkbkbO88351 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
IkbkbO88351 AC153889.1-201ENSMUST00000219257 330 ntBASIC17.61■□□□□ 0.41
IkbkbO88351 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC17.61■□□□□ 0.41
IkbkbO88351 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
IkbkbO88351 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
IkbkbO88351 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
IkbkbO88351 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
IkbkbO88351 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms