Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Ubr1O70481 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ubr1O70481 Gm44729-201ENSMUST00000206759 2052 ntBASIC20.55■□□□□ 0.88
Ubr1O70481 Gm26596-201ENSMUST00000180464 2655 ntBASIC20.55■□□□□ 0.88
Ubr1O70481 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Ubr1O70481 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ubr1O70481 Gm29361-201ENSMUST00000183323 2000 ntBASIC20.55■□□□□ 0.88
Ubr1O70481 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Ubr1O70481 Mir7036b-201ENSMUST00000184791 63 ntBASIC20.55■□□□□ 0.88
Ubr1O70481 Gm7063-201ENSMUST00000186840 981 ntBASIC20.55■□□□□ 0.88
Ubr1O70481 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC20.55■□□□□ 0.88
Ubr1O70481 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ubr1O70481 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ubr1O70481 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ubr1O70481 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC20.55■□□□□ 0.88
Ubr1O70481 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ubr1O70481 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ubr1O70481 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Ubr1O70481 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ubr1O70481 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ubr1O70481 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ubr1O70481 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Ubr1O70481 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC20.54■□□□□ 0.88
Ubr1O70481 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC20.54■□□□□ 0.88
Ubr1O70481 Gm5628-201ENSMUST00000222318 1049 ntBASIC20.54■□□□□ 0.88
Ubr1O70481 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ubr1O70481 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ubr1O70481 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Ubr1O70481 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ubr1O70481 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ubr1O70481 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ubr1O70481 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ubr1O70481 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ubr1O70481 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ubr1O70481 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ubr1O70481 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC20.54■□□□□ 0.88
Ubr1O70481 Gm6226-201ENSMUST00000117765 1146 ntBASIC20.54■□□□□ 0.88
Ubr1O70481 Gm14722-201ENSMUST00000118943 689 ntBASIC20.54■□□□□ 0.88
Ubr1O70481 Gm11025-201ENSMUST00000140773 466 ntBASIC20.54■□□□□ 0.88
Ubr1O70481 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Ubr1O70481 Gm43474-201ENSMUST00000196415 774 ntBASIC20.54■□□□□ 0.88
Ubr1O70481 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ubr1O70481 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ubr1O70481 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ubr1O70481 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ubr1O70481 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ubr1O70481 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ubr1O70481 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC20.53■□□□□ 0.88
Ubr1O70481 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ubr1O70481 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC20.53■□□□□ 0.88
Ubr1O70481 Grk6-207ENSMUST00000225925 2769 ntBASIC20.53■□□□□ 0.88
Ubr1O70481 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
Ubr1O70481 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC20.53■□□□□ 0.88
Ubr1O70481 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ubr1O70481 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ubr1O70481 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC20.53■□□□□ 0.88
Ubr1O70481 Gm9385-201ENSMUST00000117563 472 ntBASIC20.53■□□□□ 0.88
Ubr1O70481 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC20.53■□□□□ 0.88
Ubr1O70481 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ubr1O70481 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ubr1O70481 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ubr1O70481 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ubr1O70481 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC20.53■□□□□ 0.88
Ubr1O70481 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ubr1O70481 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ubr1O70481 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ubr1O70481 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.52■□□□□ 0.88
Ubr1O70481 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ubr1O70481 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ubr1O70481 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ubr1O70481 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC20.52■□□□□ 0.88
Ubr1O70481 Gm13365-201ENSMUST00000121188 973 ntBASIC20.52■□□□□ 0.88
Ubr1O70481 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC20.52■□□□□ 0.88
Ubr1O70481 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC20.52■□□□□ 0.88
Ubr1O70481 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ubr1O70481 AC158982.1-201ENSMUST00000228377 901 ntBASIC20.52■□□□□ 0.88
Ubr1O70481 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ubr1O70481 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Ubr1O70481 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
Ubr1O70481 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ubr1O70481 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ubr1O70481 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ubr1O70481 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ubr1O70481 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC20.51■□□□□ 0.87
Ubr1O70481 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ubr1O70481 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC20.51■□□□□ 0.87
Ubr1O70481 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ubr1O70481 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ubr1O70481 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ubr1O70481 CT025626.1-201ENSMUST00000223735 1455 ntBASIC20.51■□□□□ 0.87
Ubr1O70481 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ubr1O70481 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ubr1O70481 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Ubr1O70481 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Ubr1O70481 Gm15920-201ENSMUST00000118998 402 ntBASIC20.51■□□□□ 0.87
Ubr1O70481 Gm25948-201ENSMUST00000175334 112 ntBASIC20.51■□□□□ 0.87
Ubr1O70481 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ubr1O70481 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC20.51■□□□□ 0.87
Ubr1O70481 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ubr1O70481 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms