Protein–RNA interactions for Protein: O55029

Copb2, Coatomer subunit beta', mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb2O55029 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC18.31■□□□□ 0.52
Copb2O55029 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC18.31■□□□□ 0.52
Copb2O55029 Gm2574-201ENSMUST00000181051 1002 ntBASIC18.31■□□□□ 0.52
Copb2O55029 Gm3200-201ENSMUST00000181493 1002 ntBASIC18.31■□□□□ 0.52
Copb2O55029 Gm8825-201ENSMUST00000182565 998 ntBASIC18.31■□□□□ 0.52
Copb2O55029 Gm4518-201ENSMUST00000182638 718 ntBASIC18.31■□□□□ 0.52
Copb2O55029 Gm8330-201ENSMUST00000182754 1008 ntBASIC18.31■□□□□ 0.52
Copb2O55029 Gm4575-201ENSMUST00000182991 1002 ntBASIC18.31■□□□□ 0.52
Copb2O55029 Gm8709-201ENSMUST00000183230 1012 ntBASIC18.31■□□□□ 0.52
Copb2O55029 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC18.31■□□□□ 0.52
Copb2O55029 Gm6550-201ENSMUST00000187574 993 ntBASIC18.31■□□□□ 0.52
Copb2O55029 Gm5364-201ENSMUST00000216789 889 ntBASIC18.31■□□□□ 0.52
Copb2O55029 Gm18622-201ENSMUST00000219361 595 ntBASIC18.31■□□□□ 0.52
Copb2O55029 AC154757.1-201ENSMUST00000228289 336 ntBASIC18.31■□□□□ 0.52
Copb2O55029 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Copb2O55029 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Copb2O55029 Gm10293-201ENSMUST00000076317 1002 ntBASIC18.31■□□□□ 0.52
Copb2O55029 Gm6316-201ENSMUST00000082064 1020 ntBASIC18.31■□□□□ 0.52
Copb2O55029 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Copb2O55029 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Copb2O55029 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Copb2O55029 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Copb2O55029 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Copb2O55029 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Copb2O55029 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Copb2O55029 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Copb2O55029 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Copb2O55029 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Copb2O55029 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Copb2O55029 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC18.3■□□□□ 0.52
Copb2O55029 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC18.3■□□□□ 0.52
Copb2O55029 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC18.3■□□□□ 0.52
Copb2O55029 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Copb2O55029 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC18.3■□□□□ 0.52
Copb2O55029 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Copb2O55029 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC18.3■□□□□ 0.52
Copb2O55029 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC18.3■□□□□ 0.52
Copb2O55029 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Copb2O55029 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Copb2O55029 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Copb2O55029 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Copb2O55029 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Copb2O55029 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Copb2O55029 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Copb2O55029 Grk6-207ENSMUST00000225925 2769 ntBASIC18.3■□□□□ 0.52
Copb2O55029 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Copb2O55029 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Copb2O55029 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Copb2O55029 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Copb2O55029 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC18.29■□□□□ 0.52
Copb2O55029 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Copb2O55029 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Copb2O55029 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Copb2O55029 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC18.29■□□□□ 0.52
Copb2O55029 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Copb2O55029 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC18.29■□□□□ 0.52
Copb2O55029 Gm5712-201ENSMUST00000199748 1043 ntBASIC18.29■□□□□ 0.52
Copb2O55029 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC18.29■□□□□ 0.52
Copb2O55029 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC18.29■□□□□ 0.52
Copb2O55029 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Copb2O55029 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Copb2O55029 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Copb2O55029 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Copb2O55029 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC18.29■□□□□ 0.52
Copb2O55029 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC18.29■□□□□ 0.52
Copb2O55029 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Copb2O55029 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC18.28■□□□□ 0.52
Copb2O55029 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Copb2O55029 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Copb2O55029 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Copb2O55029 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
Copb2O55029 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Copb2O55029 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC18.28■□□□□ 0.52
Copb2O55029 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Copb2O55029 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Copb2O55029 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Copb2O55029 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Copb2O55029 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Copb2O55029 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC18.28■□□□□ 0.52
Copb2O55029 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC18.28■□□□□ 0.52
Copb2O55029 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Copb2O55029 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC18.28■□□□□ 0.52
Copb2O55029 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
Copb2O55029 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC18.28■□□□□ 0.52
Copb2O55029 AC117588.1-201ENSMUST00000228510 999 ntBASIC18.28■□□□□ 0.52
Copb2O55029 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Copb2O55029 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Copb2O55029 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Copb2O55029 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Copb2O55029 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC18.28■□□□□ 0.52
Copb2O55029 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Copb2O55029 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Copb2O55029 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Copb2O55029 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Copb2O55029 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Copb2O55029 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Copb2O55029 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Copb2O55029 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Copb2O55029 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Copb2O55029 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms