Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC17.57■□□□□ 0.4
Prom1O54990 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Prom1O54990 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Prom1O54990 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Prom1O54990 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.57■□□□□ 0.4
Prom1O54990 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC17.57■□□□□ 0.4
Prom1O54990 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prom1O54990 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC17.56■□□□□ 0.4
Prom1O54990 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Prom1O54990 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prom1O54990 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Prom1O54990 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prom1O54990 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prom1O54990 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Prom1O54990 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Prom1O54990 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Prom1O54990 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prom1O54990 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.56■□□□□ 0.4
Prom1O54990 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prom1O54990 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prom1O54990 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prom1O54990 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prom1O54990 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prom1O54990 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC17.56■□□□□ 0.4
Prom1O54990 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prom1O54990 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prom1O54990 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Prom1O54990 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prom1O54990 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prom1O54990 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prom1O54990 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prom1O54990 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.55■□□□□ 0.4
Prom1O54990 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prom1O54990 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Prom1O54990 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prom1O54990 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.55■□□□□ 0.4
Prom1O54990 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prom1O54990 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prom1O54990 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prom1O54990 Gm26308-201ENSMUST00000157768 69 ntBASIC17.55■□□□□ 0.4
Prom1O54990 Gm17968-201ENSMUST00000194902 784 ntBASIC17.55■□□□□ 0.4
Prom1O54990 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
Prom1O54990 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Prom1O54990 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prom1O54990 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC17.55■□□□□ 0.4
Prom1O54990 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Prom1O54990 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Prom1O54990 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prom1O54990 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prom1O54990 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Prom1O54990 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Prom1O54990 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
Prom1O54990 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Prom1O54990 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Prom1O54990 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prom1O54990 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Prom1O54990 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prom1O54990 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.55■□□□□ 0.4
Prom1O54990 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Prom1O54990 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prom1O54990 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prom1O54990 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prom1O54990 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.54■□□□□ 0.4
Prom1O54990 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prom1O54990 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Prom1O54990 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Prom1O54990 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prom1O54990 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prom1O54990 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Prom1O54990 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC17.54■□□□□ 0.4
Prom1O54990 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Prom1O54990 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC17.54■□□□□ 0.4
Prom1O54990 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Prom1O54990 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prom1O54990 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prom1O54990 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Prom1O54990 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prom1O54990 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prom1O54990 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prom1O54990 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prom1O54990 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prom1O54990 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Prom1O54990 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prom1O54990 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Prom1O54990 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Prom1O54990 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Prom1O54990 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prom1O54990 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prom1O54990 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC17.53■□□□□ 0.4
Prom1O54990 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prom1O54990 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prom1O54990 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prom1O54990 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.53■□□□□ 0.4
Prom1O54990 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Prom1O54990 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Prom1O54990 Mir8117-201ENSMUST00000184773 107 ntBASIC17.53■□□□□ 0.4
Prom1O54990 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC17.53■□□□□ 0.4
Prom1O54990 Ndufaf2-202ENSMUST00000223734 556 ntBASIC17.53■□□□□ 0.4
Prom1O54990 Chchd1-203ENSMUST00000224633 557 ntBASIC17.53■□□□□ 0.4
Prom1O54990 Gm15500-202ENSMUST00000071641 1019 ntBASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms